RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZNF146Q15072 292 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 ZNF880Q6PDB4 577 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 PRSS54Q6PEW0 395 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 ZNF565Q8N9K5 539 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 TINAGQ9UJW2 476 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 FBXO9Q9UK97 447 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-204ENST00000582252 PCDHB10Q9UN67 800 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 RNF222A6NCQ9 220 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 BET1O15155 118 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 SRPXP78539 464 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 HLA-DRB3P79483 266 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 NAAAQ02083 359 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 PHLDA2Q53GA4 152 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 C6orf183Q5T699 404 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 RGS7BPQ6MZT1 257 aaPredicted RBP19.21■□□□□ 0.67
CCDC47-204ENST00000582252 ZNF474Q6S9Z5 364 aaPredicted RBP19.21■□□□□ 0.67
CCDC47-204ENST00000582252 LRTM2Q8N967 370 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 ST6GALNAC3Q8NDV1 305 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 CNTNAP3BQ96NU0 1288 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 CNTNAP3Q9BZ76 1288 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 TMEM165Q9HC07 324 aa19.21■□□□□ 0.67
CCDC47-204ENST00000582252 SCTP09683 121 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 GLI4P10075 376 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 LYL1P12980 280 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 TMEM187Q14656 261 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 LGI3Q8N145 548 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 RPRMLQ8N4K4 120 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 OR10C1Q96KK4 312 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 CITED4Q96RK1 184 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 PIGMQ9H3S5 423 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 AUP1Q9Y679 476 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 H0YL77 283 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 MLNRO43193 412 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 OR2H2O95918 312 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 OR5AC1P0C628 307 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 FABP6P51161 128 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 RND3P61587 244 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 IAH1Q2TAA2 248 aaPredicted RBP19.2■□□□□ 0.66
CCDC47-204ENST00000582252 ESCO2Q56NI9 601 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 LIAT1Q6ZQX7 453 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 S100PBPQ96BU1 408 aa19.2■□□□□ 0.66
CCDC47-204ENST00000582252 KALRNO60229 2985 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 ZNF205O95201 554 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 SMCO1Q147U7 214 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 ST8SIA2Q92186 375 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 ARPC5LQ9BPX5 153 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 TLNRD1Q9H1K6 362 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 HES4Q9HCC6 221 aa19.19■□□□□ 0.66
CCDC47-204ENST00000582252 SLC33A1O00400 549 aaPredicted RBP19.18■□□□□ 0.66
CCDC47-204ENST00000582252 TUSC2O75896 110 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 CRYAAP02489 173 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 S100GP29377 79 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 CASP6P55212 293 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 USB1Q9BQ65 265 aaKnown RBP19.18■□□□□ 0.66
CCDC47-204ENST00000582252 GSKIPQ9P0R6 139 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 DNAJB11Q9UBS4 358 aa19.18■□□□□ 0.66
CCDC47-204ENST00000582252 A0A1B0GW55 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 A6NLC8 198 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 MPTX1A8MV57 137 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 LEUTXA8MZ59 168 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 M0R1B8 84 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 SIRPB1O00241 398 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 GPR31O00270 319 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 SPDEFO95238 335 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 RLN2P04090 185 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L2P0CJ85 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L3P0CJ86 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L4P0CJ87 422 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L5P0CJ88 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L6P0CJ89 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4L7P0CJ90 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 ZNF83P51522 516 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 IGFBP7Q16270 282 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 GGNBP1Q5YKI7 109 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 ALKAL2Q6UX46 152 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 OR10J5Q8NHC4 309 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 SECTM1Q8WVN6 248 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 PHYHIPLQ96FC7 376 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 CABLES2Q9BTV7 478 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 RNF126Q9BV68 326 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 ZFP57Q9NU63 452 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 DUX4Q9UBX2 424 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 A0A1B0GWJ7 208 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 MPPED1O15442 326 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 IL15RAQ13261 267 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 RAB32Q13637 225 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 ZNF497Q6ZNH5 498 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 KIRREL1Q96J84 757 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 ZNF471Q9BX82 626 aaPredicted RBP19.17■□□□□ 0.66
CCDC47-204ENST00000582252 SLC5A7Q9GZV3 580 aa19.17■□□□□ 0.66
CCDC47-204ENST00000582252 PIGBOS1A0A0B4J2F0 54 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 PHF1O43189 567 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-204ENST00000582252 HAND1O96004 215 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 S100A10P60903 97 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 HERPUD1Q15011 391 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 CMTM1Q8IZ96 169 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 TAAR3PQ9P1P4 343 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 SH3BGRL2Q9UJC5 107 aa19.16■□□□□ 0.66
CCDC47-204ENST00000582252 C3orf85A0A1B0GTC6 90 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 NPIPB11E5RHQ5 1161 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms