RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 KBTBD11-OT1A0A1B0GTJ5 212 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 SHISA3A0PJX4 238 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 SLC22A1O15245 554 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 VSIG8P0DPA2 414 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 SSTR5P35346 364 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 KCNJ3P48549 501 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 QRFPP83859 136 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 FOXL1Q12952 345 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 DYNC1I2Q13409 638 aaKnown RBP16.27■□□□□ 0.2
SS18-218ENST00000581021 LRRC75BQ2VPJ9 315 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 PLA1AQ53H76 456 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 UBE2UQ5VVX9 321 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 MRPS24Q96EL2 167 aaKnown RBP16.27■□□□□ 0.2
SS18-218ENST00000581021 KIRREL1Q96J84 757 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 CLEC7AQ9BXN2 247 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 LINC00574Q9H8X3 128 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 NDUFB11Q9NX14 153 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 CALYQ9NYX4 217 aa16.27■□□□□ 0.2
SS18-218ENST00000581021 TBL2Q9Y4P3 447 aaKnown RBP16.27■□□□□ 0.2
SS18-218ENST00000581021 ZNF729A6NN14 1252 aaPredicted RBP16.26■□□□□ 0.19
SS18-218ENST00000581021 MRPS14O60783 128 aaKnown RBP16.26■□□□□ 0.19
SS18-218ENST00000581021 PSMA1P25786 263 aaKnown RBP16.26■□□□□ 0.19
SS18-218ENST00000581021 CALRP27797 417 aaKnown RBP16.26■□□□□ 0.19
SS18-218ENST00000581021 CD34P28906 385 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 RAG2P55895 527 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 LGALS4P56470 323 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 UNC119Q13432 240 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 TRAM1Q15629 374 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 SSX2Q16385 188 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 LY6EQ16553 131 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 GLT8D1Q68CQ7 371 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 SLC35E4Q6ICL7 350 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 RTN4RL2Q86UN3 420 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 BARHL1Q9BZE3 327 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 PCDHB16Q9NRJ7 776 aa16.26■□□□□ 0.19
SS18-218ENST00000581021 AK6Q9Y3D8 172 aaKnown RBP16.26■□□□□ 0.19
SS18-218ENST00000581021 A0A087X0M5 115 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 A0A1B0GX30 115 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 NDUFA7O95182 113 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 IL1AP01583 271 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 IGLV1-47P01700 117 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 RAB13P51153 203 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 RAB12Q6IQ22 244 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 CD200R1LQ6Q8B3 271 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 ZNF497Q6ZNH5 498 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 ABHD12Q8N2K0 398 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 C3orf56Q8N813 242 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 OR5R1Q8NH85 324 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 RFESDQ8TAC1 157 aa16.25■□□□□ 0.19
SS18-218ENST00000581021 TMEM30CPA0ZSE6 113 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 NPIPB11E5RHQ5 1161 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 CHST1O43916 411 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 MPIG6BO95866 241 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 HTR2CP28335 458 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 P2RY14Q15391 338 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 AANATQ16613 207 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 FAM53AQ6NSI3 398 aaPredicted RBP16.24■□□□□ 0.19
SS18-218ENST00000581021 ZNF773Q6PK81 442 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 UBALD1Q8TB05 177 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 CCDC107Q8WV48 283 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 LEAP2Q969E1 77 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 MALSU1Q96EH3 234 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 YTHDF1Q9BYJ9 559 aaKnown RBP16.24■□□□□ 0.19
SS18-218ENST00000581021 GHRLQ9UBU3 117 aa16.24■□□□□ 0.19
SS18-218ENST00000581021 A0A0A6YYD4 124 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A10PA6NDY2 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 BTBD17A6NE02 478 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A18PA6NE21 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A16PA6NEW6 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A20PA6NIJ5 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A7PA6NKC0 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A22PA8MWA6 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A12PA8MX19 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A5PA8MXJ8 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A23PA8MXZ1 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 C15orf65H3BRN8 121 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 ARL6IP5O75915 188 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 IGHV3-7P01780 117 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 MT-ND4P03905 459 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A15PP0C7V4 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A13PP0C7W8 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A14PP0C7W9 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 FAM90A24PP0C7X0 464 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 NFYBP25208 207 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 RPL15P61313 204 aaKnown RBP16.23■□□□□ 0.19
SS18-218ENST00000581021 GDPGP1Q6ZNW5 385 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 Q6ZSV7 163 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 GAPTQ8N292 157 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 SVOPQ8N4V2 548 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 ZNF565Q8N9K5 539 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 OR6M1Q8NGM8 313 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 NEK7Q8TDX7 302 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 NICN1Q9BSH3 213 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 CST11Q9H112 138 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 SLITRK2Q9H156 845 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 LRRC42Q9Y546 428 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 HILPDAQ9Y5L2 63 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 MMP24Q9Y5R2 645 aa16.23■□□□□ 0.19
SS18-218ENST00000581021 PEX16Q9Y5Y5 336 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms