RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GPX8Q8TED1 209 aa12.86□□□□□ -0.35
SS18-216ENST00000580751 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
SS18-216ENST00000580751 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
SS18-216ENST00000580751 GSX1Q9H4S2 264 aaPredicted RBP12.86□□□□□ -0.35
SS18-216ENST00000580751 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
SS18-216ENST00000580751 DEGS1O15121 323 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
SS18-216ENST00000580751 ZNF737O75373 536 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 RBBP9O75884 186 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 IL7P13232 177 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 ZNF44P15621 663 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 NDUFB7P17568 137 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 DUSP1P28562 367 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 AP3S2P59780 193 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 ACTBP60709 375 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 ACTG1P63261 375 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 PAX5Q02548 391 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 SCN1BQ07699 218 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 DCAF12L2Q5VW00 463 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 SIGIRRQ6IA17 410 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 BTNL3Q6UXE8 466 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 SNX29P2Q8IUI4 249 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 SETD6Q8TBK2 473 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 PECRQ9BY49 303 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 MTFP1Q9UDX5 166 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
SS18-216ENST00000580751 TRBV23-1A0A0A0MS06 115 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 C22orf46C9J442 243 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 J3QLI3 93 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 J3QRK9 145 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 K7N7A8 449 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 SIRPB1O00241 398 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 FCN3O75636 299 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 OR2H2O95918 312 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 TK1P04183 234 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 GNB3P16520 340 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 GNG2P59768 71 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
SS18-216ENST00000580751 Q6P435 159 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 BTN2A1Q7KYR7 527 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 IZUMO1Q8IYV9 350 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 OR8H2Q8N162 312 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
SS18-216ENST00000580751 SNX22Q96L94 193 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 KCNK7Q9Y2U2 307 aa12.84□□□□□ -0.35
SS18-216ENST00000580751 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 LIPFP07098 398 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 DTYMKP23919 212 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 INPP1P49441 399 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 DEFA1P59665 94 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 DEFA3P59666 94 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
SS18-216ENST00000580751 PAX2Q02962 417 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 BAK1Q16611 211 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 FGFRL1Q8N441 504 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 TRIM63Q969Q1 353 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
SS18-216ENST00000580751 DMRTB1Q96MA1 342 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 C7orf50Q9BRJ6 194 aaKnown RBP12.83□□□□□ -0.36
SS18-216ENST00000580751 DCTN5Q9BTE1 182 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 MMP26Q9NRE1 261 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 RPUSD1Q9UJJ7 312 aaKnown RBP12.83□□□□□ -0.36
SS18-216ENST00000580751 ANAPC10Q9UM13 185 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 INSIG2Q9Y5U4 225 aa12.83□□□□□ -0.36
SS18-216ENST00000580751 TRBV6-6A0A0A6YYG2 114 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 KIR2DS1A0A191URI9 304 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 TMEM235A6NFC5 223 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 PSPNO60542 156 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 CSN2P05814 226 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 CSF1P09603 554 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 CD3GP09693 182 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 TBPP20226 339 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 RCVRNP35243 200 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 DGCR2P98153 550 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 DYRK1AQ13627 763 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 GRK1Q15835 563 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 NKAPLQ5M9Q1 402 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 ATAD3CQ5T2N8 411 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 FAHD2BQ6P2I3 314 aaPredicted RBP12.82□□□□□ -0.36
SS18-216ENST00000580751 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 C6orf201Q7Z4U5 140 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 GAPTQ8N292 157 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 TEX29Q8N6K0 151 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 SUMF2Q8NBJ7 301 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 C8orf46Q8TAG6 207 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 FAHD2AQ96GK7 314 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
SS18-216ENST00000580751 NCOR1P1Q9H4R4 102 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms