RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ZNF146Q15072 292 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 LCN1P1Q5VSP4 162 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 ENTHD1Q8IYW4 607 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 TMEM109Q9BVC6 243 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 OR51V1Q9H2C8 321 aa10.48□□□□□ -0.73
CSNK1D-213ENST00000580446 MEIKINA0A087WXM9 373 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 LOC102724200A0A096LPH7 203 aaPredicted RBP10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 IGHV3-43A0A0B4J1X8 118 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 TRBV2A0A0J9YWF9 115 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 SLC31A2O15432 143 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 TTRP02766 147 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 TRGV3P03979 118 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 IGHV3-43DP0DP04 118 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 ZP3P21754 424 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 BMI1P35226 326 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 APOFQ13790 326 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 UBE2V2Q15819 145 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 PLEKHG7Q6ZR37 379 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 OR14K1Q8NGZ2 314 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 DHRS1Q96LJ7 313 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 TSSK6Q9BXA6 273 aa10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 MRM2Q9UI43 246 aaKnown RBP10.47□□□□□ -0.73
CSNK1D-213ENST00000580446 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 SH2D1BO14796 132 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 MRASO14807 208 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 GSTA4O15217 222 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 SOX14O95416 240 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 HLA-DRB1P01911 266 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 MECP2P51608 486 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 CDC42P60953 191 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 VSNL1P62760 191 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 TSPAN31Q12999 210 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 RBMS2Q15434 407 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 ODF4Q2M2E3 257 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 GNPDA2Q8TDQ7 276 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 RFT1Q96AA3 541 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 INTS9Q9NV88 658 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 ARMC1Q9NVT9 282 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 CMTM6Q9NX76 183 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 CNOT2Q9NZN8 540 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 GAB2Q9UQC2 676 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 V9GYS6 101 aa10.46□□□□□ -0.73
CSNK1D-213ENST00000580446 A0A1B0GTI1 187 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 MAGEB4O15481 346 aaPredicted RBP10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 GADD45GO95257 159 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 IFNA4P05014 189 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 ACTBP60709 375 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 SPIN3Q5JUX0 258 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 IQCF1Q8N6M8 205 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 TCEANCQ8N8B7 351 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 OR9Q2Q8NGE9 314 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 FAM162AQ96A26 154 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 C7orf34Q96L11 122 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 HMG20AQ9NP66 347 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 MBNL3Q9NUK0 354 aaKnown RBP10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 MYCBP2O75592 4640 aa10.45□□□□□ -0.74
CSNK1D-213ENST00000580446 IGKV1-12A0A0C4DH73 117 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 IGKV1D-12P01611 117 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 INAFM2P0DMQ5 153 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 VHLP40337 213 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 BLVRAP53004 296 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 ACTBL2Q562R1 376 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 TNFAIP8L3Q5GJ75 292 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 Q6P435 159 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 ZDHHC13Q8IUH4 622 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 SLC15A3Q8IY34 581 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 RDH12Q96NR8 316 aa10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 SEBOXQ9HB31 216 aaPredicted RBP10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 NUFIP1Q9UHK0 495 aaKnown RBP10.44□□□□□ -0.74
CSNK1D-213ENST00000580446 RIIAD1A6NNX1 92 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 NPIPB11E5RHQ5 1161 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 DEFB4AO15263 64 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 ALDH3A2P51648 485 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 LIPEQ05469 1076 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 C5orf64Q2M2E5 130 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 LIN54Q6MZP7 749 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 DNAAF1Q8NEP3 725 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.43□□□□□ -0.741e-8■■■■■ 49.8
CSNK1D-213ENST00000580446 C7orf26Q96N11 449 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 ZNF355PQ9NSJ1 428 aa10.43□□□□□ -0.74
CSNK1D-213ENST00000580446 IGLV2-18A0A075B6J9 118 aa10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 C13orf42A0A1B0GVH6 325 aa10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 FCN1O00602 326 aa10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 ARPC1BO15143 372 aaKnown RBP10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 MRPL3P09001 348 aaKnown RBP10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 ZNF3P17036 446 aa10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 ATF4P18848 351 aaPredicted RBP10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 CX3CL1P78423 397 aa10.42□□□□□ -0.74
CSNK1D-213ENST00000580446 LSAMPQ13449 338 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms