RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SMCO3A2RU48 225 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 C7orf77A4D0Y5 90 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LRRC30A6NM36 301 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 OR52A4PA6NMU1 304 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 DHRS7CA6NNS2 312 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ANKRD30BLA7E2S9 258 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 HSBP1L1C9JCN9 74 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TMEM238C9JI98 176 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 GABARAPH6UMI1 98 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 M0R143 59 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MFNGO00587 321 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 FFAR1O14842 300 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 GEMIN2O14893 280 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 AGPAT2O15120 278 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TAPBPO15533 448 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 B4GALT5O43286 388 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 OR10H3O60404 316 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 IGHV3-23P01764 117 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 PPBPP02775 128 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CD74P04233 296 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 HSPB1P04792 205 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RPN2P04844 631 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 IFNW1P05000 195 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ARG1P05089 322 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CD5P06127 495 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CA3P07451 260 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ERCC1P07992 297 aaPredicted RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CXCL1P09341 107 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 OR8U9P0C7N5 309 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 METTL15P1P0C7V9 234 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LIPCP11150 499 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC25A4P12235 298 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TDGF1P13385 188 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TPT1P13693 172 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 GPX2P18283 190 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 FUT1P19526 365 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CELP19835 753 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 HTR2CP28335 458 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CD34P28906 385 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CD1CP29017 333 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 AGTR1P30556 359 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 BMI1P35226 326 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MAS1LP35410 378 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 DRD3P35462 400 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TAGLN2P37802 199 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 NSG1P42857 185 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LPAR6P43657 344 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RPS10P46783 165 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RABIFP47224 123 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CSNK1DP48730 415 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 P2RX1P51575 399 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CAV2P51636 162 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 STC1P52823 247 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SUCLG1P53597 346 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ATP1B3P54709 279 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LIM2P55344 173 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 NDUFA6P56556 154 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RPS8P62241 208 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SELENOTP62341 195 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RPS15P62841 145 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 PITPNAQ00169 270 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 BDH1Q02338 343 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 TLE4Q04727 773 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ACVR1Q04771 509 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RAB40BQ12829 278 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF154Q13106 437 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SNTB2Q13425 540 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 DDX39BQ13838 428 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 IHHQ14623 411 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 GPNMBQ14956 572 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 JOSD1Q15040 202 aaPredicted RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 RHEBQ15382 184 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CEBPEQ15744 281 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MAPK14Q16539 360 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC25A52Q3SY17 297 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CHRFAM7AQ494W8 412 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MESTQ5EB52 335 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 HIST2H3PS2Q5TEC6 136 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 KHDRBS2Q5VWX1 349 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 PTRHD1Q6GMV3 140 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 OR8G2PQ6IF36 304 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LPCAT3Q6P1A2 487 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MED27Q6P2C8 311 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 FAM199XQ6PEV8 388 aaPredicted RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ARL9Q6T311 187 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF322Q6U7Q0 402 aaPredicted RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SBSNQ6UWP8 590 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 DRAM2Q6UX65 266 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 CERS6Q6ZMG9 384 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ACOT7LQ6ZUV0 252 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC36A1Q7Z2H8 476 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SMIM15Q7Z3B0 74 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 HSD11B1LQ7Z5J1 315 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35E3Q7Z769 313 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 LHFPL4Q7Z7J7 247 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 MRPL52Q86TS9 123 aaKnown RBP1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 ACOT1Q86TX2 421 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 BIVMQ86UB2 503 aa1.56□□□□□ -2.16
PTP4A1-204ENST00000578299 VRK2Q86Y07 508 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms