RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ECI1P42126 302 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 HFEQ30201 348 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 OR4A4PQ8NGN8 299 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 MRGPRFQ96AM1 343 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 COQ2Q96H96 371 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 DNTTIP1Q9H147 329 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF665Q9H7R5 613 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 UBTD1Q9HAC8 227 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ARFGEF3Q5TH69 2177 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 NKX6-3A6NJ46 265 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 K7N7A8 449 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF205O95201 554 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 IL5P05113 134 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 RCC1P18754 421 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ANXA7P20073 488 aaKnown RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 SURF2Q15527 256 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 KRBOX4Q5JUW0 171 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ATPAF1Q5TC12 328 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 METTL11BQ5VVY1 283 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF660Q6AZW8 331 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 DHRS11Q6UWP2 260 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF788Q6ZQV5 615 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 DEFB108BQ8NET1 73 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 CCDC107Q8WV48 283 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 NEU4Q8WWR8 484 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF2Q9BSG1 426 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 FAM234AQ9H0X4 552 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 ALX4Q9H161 411 aaPredicted RBP15.51■□□□□ 0.07
PRKCA-203ENST00000578063 KIF25Q9UIL4 384 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 USP9XQ93008 2570 aaPredicted RBP15.5■□□□□ 0.07
PRKCA-203ENST00000578063 DYSFO75923 2080 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 A0A0A6YYJ9 748 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 TRAPPC2P0DI81 140 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 TRAPPC2BP0DI82 140 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 FPR2P25090 351 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 AESQ08117 197 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 CARTPTQ16568 116 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 AADACL3Q5VUY0 350 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 OR5D13Q8NGL4 314 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 MED30Q96HR3 178 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 GAFA1Q96PS6 74 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 BEX2Q9BXY8 128 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 GHITMQ9H3K2 345 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 BEX1Q9HBH7 125 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 GPN1Q9HCN4 374 aaPredicted RBP15.5■□□□□ 0.07
PRKCA-203ENST00000578063 MYOZ1Q9NP98 299 aaPredicted RBP15.5■□□□□ 0.07
PRKCA-203ENST00000578063 VSIG4Q9Y279 399 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 MAB21L2Q9Y586 359 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 ABCA4P78363 2273 aa15.5■□□□□ 0.07
PRKCA-203ENST00000578063 MEIKINA0A087WXM9 373 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 GYPAP02724 150 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 TK1P04183 234 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 SCTP09683 121 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 SRSF1Q07955 248 aaKnown RBP eCLIP15.49■□□□□ 0.07
PRKCA-203ENST00000578063 KCNJ8Q15842 424 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 IGSF11Q5DX21 431 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 C6orf183Q5T699 404 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 GLDNQ6ZMI3 551 aaPredicted RBP15.49■□□□□ 0.07
PRKCA-203ENST00000578063 MARCH1Q8TCQ1 289 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 DACT3Q96B18 629 aaPredicted RBP15.49■□□□□ 0.07
PRKCA-203ENST00000578063 CABLES2Q9BTV7 478 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 DLL4Q9NR61 685 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 KCNIP1Q9NZI2 227 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 PCDHB10Q9UN67 800 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 LAMP3Q9UQV4 416 aa15.49■□□□□ 0.07
PRKCA-203ENST00000578063 SIGLEC5O15389 551 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 DIRAS3O95661 229 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 NPY4RP50391 375 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 IL13RA1P78552 427 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 MRPS11P82912 194 aaKnown RBP15.48■□□□□ 0.07
PRKCA-203ENST00000578063 HMGN3Q15651 99 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 TRAT1Q6PIZ9 186 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 SLC36A1Q7Z2H8 476 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 TMED4Q7Z7H5 227 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 PEG10Q86TG7 708 aaKnown RBP15.48■□□□□ 0.07
PRKCA-203ENST00000578063 ZNF554Q86TJ5 538 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 ZNRF1Q8ND25 227 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 TANC2Q9HCD6 1990 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 OR5H14A6NHG9 310 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 FSTL3O95633 263 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 FCGR2CP31995 323 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 SEC61A1P61619 476 aaKnown RBP15.48■□□□□ 0.07
PRKCA-203ENST00000578063 TLE4Q04727 773 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 CBX3Q13185 183 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 EDDM3AQ14507 147 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 HERPUD1Q15011 391 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 CCL13Q99616 98 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 OR51J1Q9H342 316 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 NCOR1P1Q9H4R4 102 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 GPR132Q9UNW8 380 aa15.48■□□□□ 0.07
PRKCA-203ENST00000578063 HMX3A6NHT5 357 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 SNRPGP15A8MWD9 76 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 NPIPB11E5RHQ5 1161 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 BET1O15155 118 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 VSIG10L2P0DP72 767 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 ERP29P30040 261 aaKnown RBP15.47■□□□□ 0.07
PRKCA-203ENST00000578063 GLIPR1P48060 266 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 P2RX3P56373 397 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 TAS2R31P59538 309 aa15.47■□□□□ 0.07
PRKCA-203ENST00000578063 FAHD2BQ6P2I3 314 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms