RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TAS2R3Q9NYW6 316 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 OR6C3Q9NZP0 311 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
VAPA-204ENST00000577901 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 UCHL1P09936 223 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 EMX1Q04741 257 aaPredicted RBP12.97□□□□□ -0.33
VAPA-204ENST00000577901 HERPUD1Q15011 391 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 Q6ZTK2 550 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 COQ2Q96H96 371 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 DPCDQ9BVM2 203 aaPredicted RBP12.97□□□□□ -0.33
VAPA-204ENST00000577901 NCOR1P1Q9H4R4 102 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 LRRC42Q9Y546 428 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
VAPA-204ENST00000577901 A0A1W2PP11 408 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 OPN1MWP04001 364 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 ARG1P05089 322 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 UBBP0CG47 229 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
VAPA-204ENST00000577901 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
VAPA-204ENST00000577901 ATAD3CQ5T2N8 411 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 TMEM91Q6ZNR0 172 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 LRRTM1Q86UE6 522 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 BEND2Q8NDZ0 799 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
VAPA-204ENST00000577901 SPACA1Q9HBV2 294 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 SIGLEC9Q9Y336 463 aa12.96□□□□□ -0.33
VAPA-204ENST00000577901 MEIKINA0A087WXM9 373 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 H3BUI4 141 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 H3BUX3 64 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 CRTAPO75718 401 aaPredicted RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 EFNB2P52799 333 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 SELENOIQ9C0D9 397 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 CST11Q9H112 138 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 MEGF9Q9H1U4 602 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 TMEM133Q9H2Q1 129 aa12.95□□□□□ -0.34
VAPA-204ENST00000577901 TBL2Q9Y4P3 447 aaKnown RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 TET2Q6N021 2002 aaPredicted RBP12.95□□□□□ -0.34
VAPA-204ENST00000577901 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 MGMTP16455 207 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 CDK2P24941 298 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 KIR2DS4P43632 304 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 FABP5Q01469 135 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 PAX5Q02548 391 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 RBM39Q14498 530 aaKnown RBP12.94□□□□□ -0.34
VAPA-204ENST00000577901 C1orf100Q5SVJ3 147 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 ZNF626Q68DY1 528 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 C11orf88Q6PI97 169 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 C11orf44Q8N8P7 122 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 OR4C13Q8NGP0 309 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 C17orf50Q8WW18 174 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 MALSU1Q96EH3 234 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 SSX3Q99909 188 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 BANF2Q9H503 90 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 KIF25Q9UIL4 384 aa12.94□□□□□ -0.34
VAPA-204ENST00000577901 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 TMEM30CPA0ZSE6 113 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A8PA6NJQ4 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A22PA8MWA6 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 MMP23AO75900 390 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
VAPA-204ENST00000577901 HTR2CP28335 458 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 RANBP1P43487 201 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 PSMD7P51665 324 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 LY6EQ16553 131 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 AANATQ16613 207 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 PRAMEF5Q5TYX0 476 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 UBE2UQ5VVX9 321 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 RSBN1Q5VWQ0 802 aaPredicted RBP12.93□□□□□ -0.34
VAPA-204ENST00000577901 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
VAPA-204ENST00000577901 TMEM104Q8NE00 496 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms