RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
RNF43-202ENST00000577625 FBXW9Q5XUX1 488 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 TRIB1Q96RU8 372 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 SLC6A7Q99884 636 aa11.89□□□□□ -0.51
RNF43-202ENST00000577625 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
RNF43-202ENST00000577625 TSPAN15O95858 294 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 FABP4P15090 132 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 IL2RGP31785 369 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 ALDH3B1P43353 468 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 GUSBP1Q15486 140 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 KISS1Q15726 138 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 GUK1Q16774 197 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 CRIP3Q6Q6R5 217 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 ZNF101Q8IZC7 436 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 RBMXL3Q8N7X1 1067 aaKnown RBP11.88□□□□□ -0.51
RNF43-202ENST00000577625 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 MUCL1Q96DR8 90 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 GPER1Q99527 375 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 GLRX2Q9NS18 164 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 RP1L1Q8IWN7 2480 aaPredicted RBP11.88□□□□□ -0.51
RNF43-202ENST00000577625 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 EDN3P14138 238 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 UCP2P55851 309 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 CASTOR1Q8WTX7 329 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 AQP3Q92482 292 aa11.88□□□□□ -0.51
RNF43-202ENST00000577625 OPN3Q9H1Y3 402 aaPredicted RBP11.88□□□□□ -0.51
RNF43-202ENST00000577625 SMCO3A2RU48 225 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 WIPF3A6NGB9 483 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 EREGO14944 169 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 XRCC2O43543 280 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 ZNF25P17030 456 aaPredicted RBP11.87□□□□□ -0.51
RNF43-202ENST00000577625 ID4P47928 161 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 COTL1Q14019 142 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 ZNF260Q3ZCT1 412 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 DMRTC1Q5HYR2 192 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 GFI1BQ5VTD9 330 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 OR1K1Q8NGR3 316 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 TERB2Q8NHR7 220 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
RNF43-202ENST00000577625 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 SCRT1Q9BWW7 348 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 LPAR5Q9H1C0 372 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 ATMQ13315 3056 aa11.87□□□□□ -0.51
RNF43-202ENST00000577625 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 PHOX2AO14813 284 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 CSTBP04080 98 aaKnown RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 CHRM2P08172 466 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 ARR3P36575 388 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 PRSS12P56730 875 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 FAM189A2Q15884 450 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 ACSF3Q4G176 576 aaPredicted RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 RPL7L1Q6DKI1 246 aaKnown RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 TMEM104Q8NE00 496 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 KCNJ16Q9NPI9 418 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 MSRB2Q9Y3D2 182 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 TMEM235A6NFC5 223 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 CDC14BO60729 498 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 CST4P01036 141 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 LINC00614P0C842 121 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 CD200P41217 278 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 FAM3AP98173 230 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 ZNF92Q03936 586 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 GAGE1Q13065 139 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 OR8B8Q15620 311 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 HIKESHIQ53FT3 197 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 TMEM42Q69YG0 159 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 C9orf106Q8NAJ2 232 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 EIF5A2Q9GZV4 153 aaKnown RBP11.86□□□□□ -0.51
RNF43-202ENST00000577625 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
RNF43-202ENST00000577625 DVL1O14640 695 aa11.85□□□□□ -0.51
RNF43-202ENST00000577625 MPIG6BO95866 241 aa11.85□□□□□ -0.51
RNF43-202ENST00000577625 PET100P0DJ07 73 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms