RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 GDNFP39905 211 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 VDAC2P45880 294 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-215ENST00000577085 DEFA6Q01524 100 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 Q8NFD4 153 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 RPEQ96AT9 228 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 KIRREL1Q96J84 757 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 PGLYRP3Q96LB9 341 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 MMP28Q9H239 520 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 SCN3BQ9NY72 215 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 MRPS28Q9Y2Q9 187 aaKnown RBP12.47□□□□□ -0.41
SF3B3-215ENST00000577085 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 A0A087X0M5 115 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 A0A1B0GX30 115 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 OOSP1A8MZH6 123 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 PTGES3LE9PB15 166 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 FBXO24O75426 580 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 GPX5O75715 221 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 IGFBP3P17936 291 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-215ENST00000577085 CD24P25063 80 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 RPS11P62280 158 aaKnown RBP eCLIP12.46□□□□□ -0.41
SF3B3-215ENST00000577085 DOC2BQ14184 412 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 TPTE2P1Q5T6R2 138 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 RSBN1Q5VWQ0 802 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-215ENST00000577085 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 GLIPR1L1Q6UWM5 242 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF485Q8NCK3 441 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 OR10X1Q8NGY0 326 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 RFESDQ8TAC1 157 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 PLPPR1Q8TBJ4 325 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 TFAP2CQ92754 450 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 TOMM40LQ969M1 308 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 MUL1Q969V5 352 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 IFT22Q9H7X7 185 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
SF3B3-215ENST00000577085 PKD1L1Q8TDX9 2849 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 MAGEA13PA6NCF6 341 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 FAM90A22PA8MWA6 464 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 WIPF1O43516 503 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 FAM106CPP0CH98 169 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 GZMHP20718 246 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 SSTR5P35346 364 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 GNG10P50151 68 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 BLCAPP62952 87 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 PAX5Q02548 391 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 MADCAM1Q13477 382 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 Q8N2B8 174 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 NKAIN3Q8N8D7 197 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 FBLIM1Q8WUP2 373 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 LEAP2Q969E1 77 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 MRPS24Q96EL2 167 aaKnown RBP12.45□□□□□ -0.42
SF3B3-215ENST00000577085 DERL3Q96Q80 235 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 MGAM2Q2M2H8 2515 aa12.45□□□□□ -0.42
SF3B3-215ENST00000577085 TET2Q6N021 2002 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-215ENST00000577085 TRBV5-7A0A0A0MS05 114 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 TRAV39A0A0B4J263 110 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 J3QR06 171 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 CD1AP06126 327 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 NSUN5P1Q3KNT7 163 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 LAIR2Q6ISS4 152 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 CCDC107Q8WV48 283 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 CFHR4Q92496 578 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
SF3B3-215ENST00000577085 A0A1W2PP11 408 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 M0QZK8 103 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 AIPO00170 330 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 SDCBPO00560 298 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-215ENST00000577085 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-215ENST00000577085 OR2F2O95006 317 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 CDK1P06493 297 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 CGB3P0DN86 165 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 CGB7P0DN87 165 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 EMX1Q04741 257 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-215ENST00000577085 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-215ENST00000577085 HES1Q14469 280 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 MED22Q15528 200 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 MS4A15Q8N5U1 240 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 ARL11Q969Q4 196 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 SELENOIQ9C0D9 397 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 VCX3BQ9H321 246 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-215ENST00000577085 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 PSG11Q9UQ72 335 aa12.43□□□□□ -0.42
SF3B3-215ENST00000577085 NPIPB11E5RHQ5 1161 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms