RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SPACA5Q96QH8 159 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 MBOAT4Q96T53 435 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 THTPAQ9BU02 230 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 LINC00574Q9H8X3 128 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGHV1-3A0A0C4DH29 117 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 LCE6AA0A183 80 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 NPIPB11E5RHQ5 1161 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGHG4P01861 327 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR8U8P0C7N1 319 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR5H8P0DN80 308 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 MTNR1BP49286 362 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 ISL1P61371 349 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 GNGT1P63211 74 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 TP53I3Q53FA7 332 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR13C3Q8NGS6 347 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR13C9Q8NGT0 318 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR2G2Q8NGZ5 317 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 RFKQ969G6 155 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 UTP4Q969X6 686 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 RASL11BQ9BPW5 248 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 CHCHD3Q9NX63 227 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
CTDNEP1-212ENST00000576613 HCKP08631 526 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 EPHA2P29317 976 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 SSTR5P35346 364 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 REG1BP48304 166 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 KCNJ3P48549 501 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 PAX5Q02548 391 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 TMED1Q13445 227 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 KCTD20Q7Z5Y7 419 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 Q8N6K4 173 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 Q8N9W7 124 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR11H1Q8NG94 326 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR8H1Q8NGG4 311 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 RFESDQ8TAC1 157 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 CNIH3Q8TBE1 160 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 MRGPRDQ8TDS7 321 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 CPNE2Q96FN4 548 aaPredicted RBP9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 NR1H4Q96RI1 486 aaPredicted RBP9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 FAM118AQ9NWS6 357 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 FRRS1LQ9P0K9 344 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 MYRFQ9Y2G1 1151 aa9.1□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGHV3-72A0A0B4J1Y9 119 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 A0A1W2PPE3 182 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 TCRBV3S1A0A5B6 114 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 G3V2T6 193 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 MITFO75030 526 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 MOSP00540 346 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 IL3RAP26951 378 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 PSMB8P28062 276 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 SOX6P35712 828 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 CCR9P51686 369 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 CFHR3Q02985 330 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 KISS1Q15726 138 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 RSBN1Q5VWQ0 802 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 ELP2Q6IA86 826 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 FDX2Q6P4F2 183 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZNF429Q86V71 674 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR51A4Q8NGJ6 313 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 S1PR3Q99500 378 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZCCHC4Q9H5U6 513 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZNF580Q9UK33 172 aa9.09□□□□□ -0.95
CTDNEP1-212ENST00000576613 RYR2Q92736 4967 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 TRAV24A0A0B4J272 114 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 TXNL1O43396 289 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 SULT1B1O43704 296 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 IGF1P05019 195 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 RPSAP08865 295 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 HTR1AP08908 422 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 T-ENOLP0DO92 83 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 GZMHP20718 246 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 CD1BP29016 333 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 NANOS3P60323 173 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZP1P60852 638 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF85Q03923 595 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF616Q08AN1 781 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 IL13RA2Q14627 380 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 KDM4DQ6B0I6 523 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 TMEM65Q6PI78 240 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR5D14Q8NGL3 314 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR8J1Q8NGP2 316 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR1N2Q8NGR9 330 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR10AC1Q8NH08 325 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 RTN4IP1Q8WWV3 396 aaPredicted RBP9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 RNFT2Q96EX2 444 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 UBE2E2Q96LR5 201 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 KCTD7Q96MP8 289 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 CHCHD6Q9BRQ6 235 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 ISYNA1Q9NPH2 558 aa9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 HUWE1Q7Z6Z7 4374 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-212ENST00000576613 SDCBPO00560 298 aaPredicted RBP9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 SLC16A6O15403 523 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms