RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FAM90A18PA6NE21 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A16PA6NEW6 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A20PA6NIJ5 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A7PA6NKC0 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 ZNF729A6NN14 1252 aaPredicted RBP6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A12PA8MX19 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A5PA8MXJ8 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A23PA8MXZ1 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 DEGS1O15121 323 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TSPAN9O75954 239 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A15PP0C7V4 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A13PP0C7W8 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A14PP0C7W9 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 FAM90A24PP0C7X0 464 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 MGMTP16455 207 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 MAPK3P27361 379 aaPredicted RBP6.98□□□□□ -1.29
SMG6-216ENST00000575176 CHATP28329 748 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 GABRA5P31644 462 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 KCNJ3P48549 501 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 RAG2P55895 527 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 LOXL3P58215 753 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 BLMHQ13867 455 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 LRRC75BQ2VPJ9 315 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 SLC35E4Q6ICL7 350 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 OR10K2Q6IF99 312 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 BRICD5Q6PL45 260 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 C5orf24Q7Z6I8 188 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 JAGN1Q8N5M9 183 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 ZNF439Q8NDP4 499 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 ZNF596Q8TC21 504 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 THRSPQ92748 146 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TMEM203Q969S6 136 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
SMG6-216ENST00000575176 CITED1Q99966 193 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 NICN1Q9BSH3 213 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TM2D1Q9BX74 207 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 CLEC7AQ9BXN2 247 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 METTL9Q9H1A3 318 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 BANF2Q9H503 90 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 C16orf95Q9H693 158 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 HEXA-AS1Q9H8Q6 139 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TNFRSF19Q9NS68 423 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 CALYQ9NYX4 217 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TCF19Q9Y242 345 aa6.98□□□□□ -1.29
SMG6-216ENST00000575176 TRGV10A0A0A0MS01 117 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 A0A1W2PPH5 198 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 A0A1W2PPI3 338 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 F2RL2O00254 374 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 SLC17A2O00624 439 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MAGEB3O15480 346 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 ZNF780AO75290 641 aaPredicted RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 OR7C1O76099 320 aaPredicted RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 ARG1P05089 322 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 OCMP0CE72 109 aaPredicted RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 GTF2F2P13984 249 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 SRMP19623 302 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 EEF1B2P24534 225 aaKnown RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 GLP1RP43220 463 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 RPS27AP62979 156 aaKnown RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 SCN1BQ07699 218 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 FOXL1Q12952 345 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 DIAPH2-AS1Q14236 149 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 HLA-DRB5Q30154 266 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 HSD17B12Q53GQ0 312 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MINOS1Q5TGZ0 78 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 AWAT2Q6E213 333 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 TET2Q6N021 2002 aaPredicted RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 Q6ZS46 218 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 CEACAM19Q7Z692 300 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 Q8N2B8 174 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 OR5R1Q8NH85 324 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MRPL30Q8TCC3 161 aaKnown RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 MRGPRDQ8TDS7 321 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 CFHR4Q92496 578 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 GCDHQ92947 438 aaPredicted RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 ZDHHC16Q969W1 377 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MRPS24Q96EL2 167 aaKnown RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 SSX3Q99909 188 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 LPAR5Q9H1C0 372 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MBNL3Q9NUK0 354 aaKnown RBP6.97□□□□□ -1.29
SMG6-216ENST00000575176 CKLFQ9UBR5 152 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 ING4Q9UNL4 249 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
SMG6-216ENST00000575176 MEIKINA0A087WXM9 373 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 TRIM64CA6NLI5 447 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 C12orf77C9JDV5 145 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 MRPS14O60783 128 aaKnown RBP6.96□□□□□ -1.3
SMG6-216ENST00000575176 NAPSAO96009 420 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 MT-ND4P03905 459 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 AMY1AP04745 511 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 AMY2AP04746 511 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 HTR2CP28335 458 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 RAB13P51153 203 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 EFNB2P52799 333 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 OR10A3P58181 314 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 HABP2Q14520 560 aaPredicted RBP6.96□□□□□ -1.3
SMG6-216ENST00000575176 ZNF880Q6PDB4 577 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 ZNF773Q6PK81 442 aa6.96□□□□□ -1.3
SMG6-216ENST00000575176 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms