RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SERPINE2P07093 398 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 NTF4P34130 210 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 APLNRP35414 380 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 CEBPDP49716 269 aaPredicted RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 TAS2R46P59540 309 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 UBE2NP61088 152 aaKnown RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 RUNX1Q01196 453 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 SRSF6Q13247 344 aaKnown RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 RPUSD3Q6P087 351 aaKnown RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 OSR2Q8N2R0 312 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF441Q8N8Z8 693 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 APH1AQ96BI3 265 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 SDSLQ96GA7 329 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 TUBA4BQ9H853 241 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 UCK1Q9HA47 277 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF286AQ9HBT8 521 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 PARP11Q9NR21 331 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 TRAPPC2LQ9UL33 140 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 BOKQ9UMX3 212 aaPredicted RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 IGHV3-43A0A0B4J1X8 118 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF587BE7ETH6 402 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 DEDDO75618 318 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 KLF7O75840 302 aaPredicted RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 TRGC2P03986 189 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 IGHV3-43DP0DP04 118 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 CNN3Q15417 329 aaKnown RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 OR8G2PQ6IF36 304 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 FAHD2BQ6P2I3 314 aaPredicted RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 LRP11Q86VZ4 500 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 CALHM1Q8IU99 346 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 HPSE2Q8WWQ2 592 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 FAHD2AQ96GK7 314 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 A0A0U1RQK1 487 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 TK1P04183 234 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 SNRPCP09234 159 aaKnown RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 CYCSP99999 105 aaKnown RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ENDOGQ14249 297 aaKnown RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 DEGS2Q6QHC5 323 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 TMEM123Q8N131 208 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 EXTL1Q92935 676 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 EMG1Q92979 244 aaKnown RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 POM121Q96HA1 1249 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 C1orf123Q9NWV4 160 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ZGRF1Q86YA3 2104 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ATG2AQ2TAZ0 1938 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 BCL3P20749 454 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 FPR2P25090 351 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 PTGDSP41222 190 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 TAS2R31P59538 309 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF674Q2M3X9 581 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 NSUN5P2Q63ZY6 315 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HEPN1Q6WQI6 88 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 C17orf82Q86X59 251 aaPredicted RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 SSX3Q99909 188 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 MRPL13Q9BYD1 178 aaKnown RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 C19orf12Q9NSK7 152 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 LIPGQ9Y5X9 500 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 COL4A2P08572 1712 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 DMXL1Q9Y485 3027 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 BORCS7-ASMTA0A0B4J1R7 106 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 SYNGR1O43759 233 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BKO60814 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 SLC34A2O95436 690 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BJP06899 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 SCTP09683 121 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 AADACP22760 399 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BOP23527 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 MPZP25189 248 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BBP33778 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 GABRA2P47869 451 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ELLP55199 621 aaPredicted RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BDP58876 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BCP62807 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 IL11RAQ14626 422 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST2H2BEQ16778 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.36□□□□□ -1.23
RPAIN-215ENST00000575112 DTWD2Q8NBA8 298 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 TCTEX1D2Q8WW35 142 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BHQ93079 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 YPEL4Q96NS1 127 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BNQ99877 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 HIST1H2BMQ99879 126 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 BCO1Q9HAY6 547 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 PRSS50Q9UI38 385 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 KPTNQ9Y664 436 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 KALRNO60229 2985 aa7.36□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF729A6NN14 1252 aaPredicted RBP7.35□□□□□ -1.23
RPAIN-215ENST00000575112 ANKRD30BLA7E2S9 258 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 CD63P08962 238 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 FABP4P15090 132 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 SUMO3P55854 103 aaPredicted RBP7.35□□□□□ -1.23
RPAIN-215ENST00000575112 RAC3P60763 192 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 RAB2AP61019 212 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 FIP1L1Q6UN15 594 aaKnown RBP7.35□□□□□ -1.23
RPAIN-215ENST00000575112 LCN15Q6UWW0 184 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 ADPRHL1Q8NDY3 354 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 OR1K1Q8NGR3 316 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
RPAIN-215ENST00000575112 RAB39BQ96DA2 213 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms