RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 KRBOX4Q5JUW0 171 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 CCDC107Q8WV48 283 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 NARFLQ9H6Q4 476 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 KIF25Q9UIL4 384 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 ANAPC10Q9UM13 185 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 TRAV39A0A0B4J263 110 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 TMEM30CPA0ZSE6 113 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 MGST3O14880 152 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 FCN3O75636 299 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 MT-ND4P03905 459 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 HLA-DMAP28067 261 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 GLIPR1P48060 266 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 KCNJ3P48549 501 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 HOGA1Q86XE5 327 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 UPRTQ96BW1 309 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 GSX2Q9BZM3 304 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 POLQO75417 2590 aa19.99■□□□□ 0.79
ATPAF1-213ENST00000574428 IGKV1D-8A0A087WSZ0 117 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 ANKRD20A5PA0PJZ0 165 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 CSF1P09603 554 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 PDLIM4P50479 330 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 PLA1AQ53H76 456 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 SLC35E4Q6ICL7 350 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 GAPTQ8N292 157 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 CHAC2Q8WUX2 184 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 FAM234AQ9H0X4 552 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 RIMS4Q9H426 269 aaPredicted RBP19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 KAAG1Q9UBP8 84 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 SLC25A10Q9UBX3 287 aaPredicted RBP19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 APCP25054 2843 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 A0A0B4J293 547 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 CENPXA8MT69 81 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 GSTT2BP0CG30 244 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 DYRK1AQ13627 763 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 TMEM155Q4W5P6 130 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 BEST4Q8NFU0 473 aa19.98■□□□□ 0.79
ATPAF1-213ENST00000574428 NBPF19A0A087WUL8 3843 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 MEIKINA0A087WXM9 373 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 MEX3AA1L020 520 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 CD3DP04234 171 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 NDUFB7P17568 137 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 RCC1P18754 421 aaPredicted RBP19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 GIFP27352 417 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 EDDM3BP56851 147 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 OR5D13Q8NGL4 314 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 C7orf50Q9BRJ6 194 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 Q9N2K0 584 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 TAS2R8Q9NYW2 309 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 TRAPPC2LQ9UL33 140 aa19.97■□□□□ 0.79
ATPAF1-213ENST00000574428 H7C1Q1 480 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 DVL1O14640 695 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 NDUFB3O43676 98 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 ECDO95905 644 aaPredicted RBP19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 RPS2P15880 293 aaKnown RBP19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 NAT1P18440 290 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 DNASE1P24855 282 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 P2RX3P56373 397 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 AP3S2P59780 193 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 FAAP20Q6NZ36 180 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 C5orf24Q7Z6I8 188 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 SPICQ8N5J4 248 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 TMEM229BQ8NBD8 167 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 MARVELD1Q9BSK0 173 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 BPESC1Q9GZL8 116 aa19.96■□□□□ 0.79
ATPAF1-213ENST00000574428 TRBV6-6A0A0A6YYG2 114 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 ZNF736B4DX44 427 aaPredicted RBP19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 TAS2R19P59542 299 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 PAX5Q02548 391 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 LRRC10Q5BKY1 277 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 OR4D10Q8NGI6 311 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 FAM168AQ92567 244 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 DCTN5Q9BTE1 182 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 EDARQ9UNE0 448 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 HECTD1Q9ULT8 2610 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 CSMD2Q7Z408 3487 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 M0QYG6 137 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 ZNF880Q6PDB4 577 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 CLEC2AQ6UVW9 174 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 ZNF286AQ9HBT8 521 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 PCDHB10Q9UN67 800 aa19.95■□□□□ 0.78
ATPAF1-213ENST00000574428 ODAMA1E959 279 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 HRH1P35367 487 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 STEAP1BQ6NZ63 245 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 AKAP14Q86UN6 197 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 CREB3L1Q96BA8 519 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 DPAGT1Q9H3H5 408 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 HRASLSQ9HDD0 168 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 BEX4Q9NWD9 120 aaPredicted RBP19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 MIOXQ9UGB7 285 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 ZNF107Q9UII5 783 aaPredicted RBP19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 ANXA10Q9UJ72 324 aa19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 ANKRD17O75179 2603 aaKnown RBP19.94■□□□□ 0.78
ATPAF1-213ENST00000574428 PMP2P02689 132 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 AKAIN1P0CW23 69 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 DEFB113Q30KQ7 82 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 C10orf105Q8TEF2 133 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 PIMREGQ9BSJ6 248 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 TINAGL1Q9GZM7 467 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 ARID1AO14497 2285 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 WNT2P09544 360 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms