RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 AK3Q9UIJ7 227 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 FAM215AQ9Y5M1 114 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 UNC80Q8N2C7 3258 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 B8ZZF3 427 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 M0R1X1 148 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 LGALS8O00214 317 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 CST4P01036 141 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 IFNA2P01563 188 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 ADRA2CP18825 462 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 FHL1Q13642 323 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 RTL8BQ17RB0 113 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 PRAMEF5Q5TYX0 476 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 FAM222BQ8WU58 562 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 RGP1Q92546 391 aaPredicted RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 RPEQ96AT9 228 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 MEGF10Q96KG7 1140 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 DHRS9Q9BPW9 319 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 CCDC168Q8NDH2 2452 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 A0A1B0GTI1 187 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 CA11O75493 328 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 SCGB2A1O75556 95 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 C1QBP02746 253 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 MMP7P09237 267 aaPredicted RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 PIGPP57054 158 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 RAB5BP61020 215 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 RHEBQ15382 184 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 C1orf100Q5SVJ3 147 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 OR5P3Q8WZ94 311 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 DYRK2Q92630 601 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 IFNL4K9M1U5 179 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 PRB1P04280 392 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 SRP14P37108 136 aaKnown RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 RPL23AP62750 156 aaKnown RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 IAH1Q2TAA2 248 aaPredicted RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 H2BFWTQ7Z2G1 175 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 SLC38A6Q8IZM9 456 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
SMG6-213ENST00000573166 ZNF319Q9P2F9 582 aa8.65□□□□□ -1.02
SMG6-213ENST00000573166 MGST3O14880 152 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 CYB5BO43169 146 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 ZNF250P15622 560 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 ZNF14P17017 642 aaPredicted RBP8.65□□□□□ -1.03
SMG6-213ENST00000573166 CEACAM8P31997 349 aaPredicted RBP8.65□□□□□ -1.03
SMG6-213ENST00000573166 CDKN1AP38936 164 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 NPBWR2P48146 333 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 IL13RA2Q14627 380 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 HIST3H3Q16695 136 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 OR5AP2Q8NGF4 316 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 RNF138Q8WVD3 245 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 WBP1Q96G27 269 aa8.65□□□□□ -1.03
SMG6-213ENST00000573166 TP53BP1Q12888 1972 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 C17orf100A8MU93 164 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 RGS13O14921 159 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 IFNA4P05014 189 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 CEBPDP49716 269 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 PLA1AQ53H76 456 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 PERPQ96FX8 193 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 KIAA1456Q9P272 454 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 SHOXO15266 292 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 GPR137BO60478 399 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 OR2H2O95918 312 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 CRYGSP22914 178 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 TOR2AQ5JU69 321 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 PAQR4Q8N4S7 273 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 ERGIC1Q969X5 290 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 ZNF75AQ96N20 296 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 SAV1Q9H4B6 383 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 LIN7CQ9NUP9 197 aaKnown RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 TNFSF13O75888 250 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 PRRX1P54821 245 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 LINC00596Q86U02 117 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 HDHD3Q9BSH5 251 aaPredicted RBP8.64□□□□□ -1.03
SMG6-213ENST00000573166 LPAR5Q9H1C0 372 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMG6-213ENST00000573166 V9GYS6 101 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 PRR14LQ5THK1 2151 aa8.64□□□□□ -1.03
SMG6-213ENST00000573166 F8W036 122 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 GPR31O00270 319 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 NDUFA2O43678 99 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 WNT5AP41221 380 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 RPP30P78346 268 aaKnown RBP8.63□□□□□ -1.03
SMG6-213ENST00000573166 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 LINC00303Q3SY05 128 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 PTX4Q96A99 478 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 PCGF1Q9BSM1 259 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 HEXA-AS1Q9H8Q6 139 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 IQCF6A8MYZ5 107 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 TRDCB7Z8K6 153 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 H0YL77 283 aa8.63□□□□□ -1.03
SMG6-213ENST00000573166 IFNA10P01566 189 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms