RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TRMUO75648 421 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 EPPINO95925 133 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CELA2AP08217 269 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 METTL15P1P0C7V9 234 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 MPC1LP0DKB6 136 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 IGLL1P15814 213 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 PRSS3P35030 304 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC25A1P53007 311 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC18A1P54219 525 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CCL23P55773 120 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 WNT4P56705 351 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 LINC00310P59036 64 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 LCN6P62502 163 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 RPS24P62847 133 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 GNG5P63218 68 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC10A2Q12908 348 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CCL14Q16627 93 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 KIAA1644Q3SXP7 199 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CLEC19AQ6UXS0 136 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 DEFB125Q8N687 156 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM178AQ8NBL3 297 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 C11orf72Q8NBR9 251 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 OR8S1Q8NH09 359 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 ROPN1LQ96C74 230 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CNRIP1Q96F85 164 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 RNF185Q96GF1 192 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 CCDC115Q96NT0 180 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 OR2M2Q96R28 347 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 DOHHQ9BU89 302 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 TBL1XR1Q9BZK7 514 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC25A31Q9H0C2 315 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 IL25Q9H293 177 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 VCXQ9H320 206 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 PRTFDC1Q9NRG1 225 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 HEBP1Q9NRV9 189 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 RNF7Q9UBF6 113 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 TRMT112Q9UI30 125 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 BCL9O00512 1426 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 RTL1A6NKG5 1358 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 IGHV4-4A0A075B6R2 117 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 A0A087WX48 190 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 UQCRHLA0A096LP55 91 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 A0A096LPI6 279 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 FAM236DA0A1B0GTK5 79 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 A0A1B0GX51 115 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 FAM92AA1XBS5 289 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM189A5PLL7 270 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 FOXI3A8MTJ6 420 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 K7EQG2 157 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 NDUFC2O95298 119 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 NTN1O95631 604 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 CRYBA1P05813 215 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 UQCRHP07919 91 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 UBBP0CG47 229 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 FAM236CP0DP71 79 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ZBTB25P24278 435 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 FMO3P31513 532 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RBP2P50120 134 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 NDUFA8P51970 172 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RRAS2P62070 204 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RPS21P63220 83 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF763Q0D2J5 394 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 C16orf72Q14CZ0 275 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RNF212Q495C1 297 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ATP6AP1LQ52LC2 224 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 C1orf100Q5SVJ3 147 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC35E4Q6ICL7 350 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM179BQ7Z7N9 219 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 KLHDC8BQ8IXV7 354 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 OR11H7Q8NGC8 314 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 OR10G6Q8NH81 332 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 CT55Q8WUE5 264 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 GEMIN6Q8WXD5 167 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 APOBEC3DQ96AK3 386 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 SMIM8Q96KF7 97 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF354BQ96LW1 612 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF747Q9BV97 191 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 GNB1LQ9BYB4 327 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 GNG8Q9UK08 70 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 RFNGQ9Y644 331 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 OVOS2A0A0J9YW53 1432 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 PTPRKQ15262 1439 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 OVOS2Q6IE36 1432 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 MIA2Q96PC5 1412 aa3.94□□□□□ -1.78
TOPBP1-210ENST00000572787 SPEF2Q9C093 1822 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 KIF15Q9NS87 1388 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 DENND4AQ7Z401 1863 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 TRAV9-2A0A087WT02 112 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 J3KT08 172 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 AIPO00170 330 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 PSPHP1O15172 72 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 RGS5O15539 181 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 POP7O75817 140 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms