RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CABLES2Q9BTV7 478 aa16.36■□□□□ 0.21
RPAIN-210ENST00000571613 MBNL3Q9NUK0 354 aaKnown RBP16.36■□□□□ 0.21
RPAIN-210ENST00000571613 KCNIP1Q9NZI2 227 aa16.36■□□□□ 0.21
RPAIN-210ENST00000571613 KCNIP3Q9Y2W7 256 aa16.36■□□□□ 0.21
RPAIN-210ENST00000571613 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-210ENST00000571613 TUBAL3A6NHL2 446 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 PPYP01298 95 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 SCTP09683 121 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 APOBEC3AP31941 199 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-210ENST00000571613 PRDX2P32119 198 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 C4orf17Q53FE4 359 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 IGSF11Q5DX21 431 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 FAM185AQ8N0U4 392 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 GCSAMQ8N6F7 178 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 CCDC71LQ8N9Z2 235 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 OR5T2Q8NGG2 359 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 OR5M8Q8NGP6 311 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 CHIAQ9BZP6 476 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 PIPOXQ9P0Z9 390 aa16.35■□□□□ 0.21
RPAIN-210ENST00000571613 NPIPB11E5RHQ5 1161 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 ATXN7O15265 892 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-210ENST00000571613 AGAP20933 346 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 EFNB3Q15768 340 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 C20orf204Q6ZNR8 217 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 OR10J5Q8NHC4 309 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 PLPPR1Q8TBJ4 325 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 CASTOR1Q8WTX7 329 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 TOMM40LQ969M1 308 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 VRK1Q99986 396 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-210ENST00000571613 FXYD6Q9H0Q3 95 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 MS4A5Q9H3V2 200 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 GCM1Q9NP62 436 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 OPN4Q9UHM6 478 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 RNF115Q9Y4L5 304 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 LRRC30A6NM36 301 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 BET1O15155 118 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 PSPNO60542 156 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 PSG2P11465 335 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 AADACP22760 399 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 COL10A1Q03692 680 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 TLE1Q04724 770 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 ATXN7L3Q14CW9 347 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-210ENST00000571613 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 CLEC18BQ6UXF7 455 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 ZBTB8BQ8NAP8 495 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-210ENST00000571613 LINC01560Q8TB33 94 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 TMPRSS13Q9BYE2 586 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 LIME1Q9H400 295 aa16.34■□□□□ 0.21
RPAIN-210ENST00000571613 TRBV6-7A0A0A0MS04 114 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 TEX13DA0A0J9YY54 714 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 CRYM-AS1A6NIL9 109 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 B9A039 149 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 SMLR1H3BR10 107 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 TUSC2O75896 110 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 IFNA2P01563 188 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 RCC1P18754 421 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 PI3P19957 117 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 NFYAP23511 347 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 RBMXP38159 391 aaKnown RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 FXYD4P59646 89 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 SRSF4Q08170 494 aaKnown RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 FGL1Q08830 312 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 C6orf183Q5T699 404 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 DMRTC2Q8IXT2 367 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-210ENST00000571613 ZNF565Q8N9K5 539 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 KIRREL1Q96J84 757 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 SNX22Q96L94 193 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 RSRP1Q9BUV0 290 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 RAB18Q9NP72 206 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 PPP1R3CQ9UQK1 317 aa16.33■□□□□ 0.2
RPAIN-210ENST00000571613 OOEPA6NGQ2 149 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 DBX1A6NMT0 343 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 E7EQL1 145 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 C3orf80F5H4A9 247 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 H2BFSP57053 126 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 PIGPP57054 158 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 SUPT4H1P63272 117 aaKnown RBP16.32■□□□□ 0.2
RPAIN-210ENST00000571613 CYCSP99999 105 aaKnown RBP16.32■□□□□ 0.2
RPAIN-210ENST00000571613 FAM222BQ8WU58 562 aa16.32■□□□□ 0.2
RPAIN-210ENST00000571613 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-210ENST00000571613 RPS2P15880 293 aaKnown RBP16.31■□□□□ 0.2
RPAIN-210ENST00000571613 EGR1P18146 543 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 S100GP29377 79 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 OR3A1P47881 315 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 CEBPDP49716 269 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-210ENST00000571613 HERPUD1Q15011 391 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 HMGN3Q15651 99 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 C2orf68Q2NKX9 166 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 KCTD9Q7L273 389 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 C1orf87Q8N0U7 546 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 ASCC1Q8N9N2 400 aaKnown RBP16.31■□□□□ 0.2
RPAIN-210ENST00000571613 GALNT14Q96FL9 552 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 PDCD10Q9BUL8 212 aa16.31■□□□□ 0.2
RPAIN-210ENST00000571613 FBXO9Q9UK97 447 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-210ENST00000571613 MUC1P15941 1255 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-210ENST00000571613 C4BPBP20851 252 aa16.3■□□□□ 0.2
RPAIN-210ENST00000571613 KRBOX4Q5JUW0 171 aa16.3■□□□□ 0.2
RPAIN-210ENST00000571613 BOLLQ8N9W6 283 aaKnown RBP16.3■□□□□ 0.2
RPAIN-210ENST00000571613 OR5D13Q8NGL4 314 aa16.3■□□□□ 0.2
RPAIN-210ENST00000571613 RTN4IP1Q8WWV3 396 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms