RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 AVPP01185 164 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 GYPAP02724 150 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 GSTP1P09211 210 aaKnown RBP11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 PTHLHP12272 177 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 GNB3P16520 340 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 COL10A1Q03692 680 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 SCN1BQ07699 218 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 PYHIN1Q6K0P9 492 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-209ENST00000571558 FAM131AQ6UXB0 335 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 RBMS3Q6XE24 437 aaKnown RBP11.36□□□□□ -0.59
RPAIN-209ENST00000571558 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 SUMF2Q8NBJ7 301 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 RAB39BQ96DA2 213 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 NEDD4LQ96PU5 975 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 FAAP24Q9BTP7 215 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DPCDQ9BVM2 203 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-209ENST00000571558 ESM1Q9NQ30 184 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 PLEKHJ1Q9NW61 149 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 RABL2AQ9UBK7 228 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-209ENST00000571558 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 GLS2Q9UI32 602 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 RABL2BQ9UNT1 228 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 MAB21L2Q9Y586 359 aa11.36□□□□□ -0.59
RPAIN-209ENST00000571558 TMEM235A6NFC5 223 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 CTDSPLO15194 276 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 PPIHO43447 177 aaKnown RBP11.35□□□□□ -0.59
RPAIN-209ENST00000571558 CA11O75493 328 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 FCN3O75636 299 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ZNF44P15621 663 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 MDH2P40926 338 aaKnown RBP11.35□□□□□ -0.59
RPAIN-209ENST00000571558 OR3A1P47881 315 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 IL18Q14116 193 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ARL6IP1Q15041 203 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 TMEM155Q4W5P6 130 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 NKAPLQ5M9Q1 402 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ATAD3CQ5T2N8 411 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 HACD4Q5VWC8 232 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 LYPD2Q6UXB3 125 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 RAB1CQ92928 201 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 CCL13Q99616 98 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SLC6A7Q99884 636 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 TMPRSS13Q9BYE2 586 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 NARFLQ9H6Q4 476 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 KAAG1Q9UBP8 84 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 MRPS7Q9Y2R9 242 aaKnown RBP11.35□□□□□ -0.59
RPAIN-209ENST00000571558 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 MEIOCA2RUB1 952 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 NDUFA2O43678 99 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SSX5O60225 188 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SELLP14151 372 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 GABRA2P47869 451 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 IL13RA1P78552 427 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 PAX5Q02548 391 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 KCNJ8Q15842 424 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 PNLIPRP3Q17RR3 467 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 PAN3Q58A45 887 aaKnown RBP11.35□□□□□ -0.59
RPAIN-209ENST00000571558 DCDC5Q6ZRR9 648 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 GAPTQ8N292 157 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 FAM216BQ8N7L0 139 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ZNRF1Q8ND25 227 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 OR4S1Q8NGB4 309 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 C15orf40Q8WUR7 153 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 TIMD4Q96H15 378 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 AK3Q9UIJ7 227 aa11.35□□□□□ -0.59
RPAIN-209ENST00000571558 UBE2QL1A1L167 161 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 K7N7A8 449 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 HSPB6O14558 160 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 GSTZ1O43708 216 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-209ENST00000571558 CSN2P05814 226 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 PRTN3P24158 256 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 PPP5CP53041 499 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 PITPNAQ00169 270 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 GUCA2AQ02747 115 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 ZNF846Q147U1 533 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 DCAF12L2Q5VW00 463 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 Q6ZPA2 131 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-209ENST00000571558 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 DYRK2Q92630 601 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 SNX22Q96L94 193 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
RPAIN-209ENST00000571558 CHST6Q9GZX3 395 aa11.34□□□□□ -0.59
RPAIN-209ENST00000571558 PPA2Q9H2U2 334 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms