RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRAV18A0A075B6X5 111 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 TMEM269A0A1B0GVZ9 245 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ISPDA4D126 451 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ERICH4A6NGS2 130 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CD300LBA8K4G0 201 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ZNF670-ZNF695F2Z2N8 137 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 LYNX1G3V0Z9 82 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 PRKYO43930 277 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 FSTL3O95633 263 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 TGFAP01135 160 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 RPSAP08865 295 aaKnown RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 TACSTD2P09758 323 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 LYNX1P0DP58 116 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CLUP10909 449 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ALOX5APP20292 161 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SLC2A5P22732 501 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 COL8A2P25067 703 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OTX1P32242 354 aaPredicted RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 MPV17P39210 176 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 NAA10P41227 235 aaPredicted RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 RPS27P42677 84 aaKnown RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 PRKXP51817 358 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ACTC1P68032 377 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ACTA1P68133 377 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR8G1Q15617 311 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 KCNJ8Q15842 424 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ZNF829Q3KNS6 432 aaPredicted RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 CHRFAM7AQ494W8 412 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 LBHQ53QV2 105 aaPredicted RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 LINC01590Q5TEZ4 76 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OTPQ5XKR4 325 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 C12orf73Q69YU5 71 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR2T2Q6IF00 324 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 PLEKHG7Q6ZR37 379 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 COX8CQ7Z4L0 72 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A42Q86VD7 318 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 TIGD4Q8IY51 512 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ZNF679Q8IYX0 411 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CBR4Q8N4T8 237 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SPICQ8N5J4 248 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 BHLHE23Q8NDY6 225 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CCDC54Q8NEL0 328 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ZNF555Q8NEP9 628 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR2T27Q8NH04 317 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR8S1Q8NH09 359 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR51F2Q8NH61 342 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OCC1Q8TAD7 63 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 FAM81AQ8TBF8 368 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 RDH12Q96NR8 316 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 OR2V2Q96R30 315 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 IL4I1Q96RQ9 567 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CIB1Q99828 191 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SMR3AQ99954 134 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 GAL3ST1Q99999 423 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 APOL4Q9BPW4 351 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SLC30A2Q9BRI3 323 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 PAPOLGQ9BWT3 736 aaKnown RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 GABARAPL3Q9BY60 117 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 VCXQ9H320 206 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 FN3KRPQ9HA64 309 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ZNF275Q9NSD4 429 aaPredicted RBP3.09□□□□□ -1.91
NUP88-202ENST00000570937 CLN6Q9NWW5 311 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 USE1Q9NZ43 259 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 KLK11Q9UBX7 282 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 IKZF2Q9UKS7 526 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 RABL2BQ9UNT1 228 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 MPC1Q9Y5U8 109 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 SNX5Q9Y5X3 404 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 AKAP9Q99996 3911 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 CADP27708 2225 aa3.09□□□□□ -1.91
NUP88-202ENST00000570937 ARID1AO14497 2285 aa3.09□□□□□ -1.92
NUP88-202ENST00000570937 NBPF19A0A087WUL8 3843 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ROS1P08922 2347 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 A0A0G2JMP0 313 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 A0A0U1RQV5 110 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 A0A0X1KG70 313 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 LOC100130705A0A1B0GUX0 176 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 IRGMA1A4Y4 181 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 LRP5LA4QPB2 252 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZSCAN5BA6NJL1 495 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 LOC110117498-PIK3R3F6TDL0 507 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 EI24O14681 340 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 TNFSF12O43508 249 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 NDUFA2O43678 99 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SELENOFO60613 162 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 FOXH1O75593 365 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 RP2O75695 350 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SULT1C4O75897 302 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 FADS2O95864 444 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 SERPINA3P01011 423 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 KRT8P05787 483 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MSMBP08118 114 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 SBK2P0C263 348 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SLC2A1P11166 492 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ATP6V1B1P15313 513 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 HTR1FP30939 366 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MDH2P40926 338 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 OR3A3P47888 321 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms