RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 RSRP1Q9BUV0 290 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 ELOVL1Q9BW60 279 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 CHST5Q9GZS9 411 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 COMMD4Q9H0A8 199 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 MOB1AQ9H8S9 216 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 PLEKHA1Q9HB21 404 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 KIF25Q9UIL4 384 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 MRPS28Q9Y2Q9 187 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 CEPT1Q9Y6K0 416 aa7.97□□□□□ -1.13
CTDNEP1-202ENST00000570380 IGKV1-12A0A0C4DH73 117 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 H3BN98 237 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 ATP6V0E1O15342 81 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGKV1D-12P01611 117 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 HSPB1P04792 205 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 C21orf33P30042 268 aaPredicted RBP7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 ATP1B3P54709 279 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 PDZK1IP1Q13113 114 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 APOFQ13790 326 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 MICAQ29983 383 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 ODF4Q2M2E3 257 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 MINDY2Q8NBR6 621 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR51T1Q8NGJ9 327 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 CASTOR1Q8WTX7 329 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 RTN4IP1Q8WWV3 396 aaPredicted RBP7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 ASB17Q8WXJ9 295 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 NSMCE2Q96MF7 247 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 ZCCHC4Q9H5U6 513 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 SPAG4Q9NPE6 437 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 KRT84Q9NSB2 600 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 SNX5Q9Y5X3 404 aa7.96□□□□□ -1.14
CTDNEP1-202ENST00000570380 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 MEIKINA0A087WXM9 373 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 TRAV41A0A0B4J266 112 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGKV1-9A0A0C4DH69 117 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 SOX15O60248 233 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 KDM4BO94953 1096 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 SSTR5P35346 364 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 MTCP1P56278 107 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 GINS1Q14691 196 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 YIPF7Q8N8F6 280 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 CHST4Q8NCG5 386 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 DNAAF1Q8NEP3 725 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 FLYWCH2Q96CP2 140 aaKnown RBP7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 MBOAT4Q96T53 435 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 NCOR1P1Q9H4R4 102 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 PARP11Q9NR21 331 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 FAM53CQ9NYF3 392 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 MAGEL2Q9UJ55 1249 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 TMEM14AQ9Y6G1 99 aa7.95□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGHV7-81A0A0B4J1V7 117 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 TRAV39A0A0B4J263 110 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 CXorf65A6NEN9 183 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 CCDC182A6NF36 153 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 HSPB6O14558 160 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 DEGS1O15121 323 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 ARPC2O15144 300 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 SYT7O43581 403 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 RGS11O94810 467 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 SERPINA3P01011 423 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGHV3-11P01762 117 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 BLVRBP30043 206 aaPredicted RBP7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 VHLP40337 213 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 CXCR4P61073 352 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 CDK5R1Q15078 307 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 ZNF322Q6U7Q0 402 aaPredicted RBP7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 GTSCR1Q86UQ5 136 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR10A7Q8NGE5 316 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 RFT1Q96AA3 541 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 LRGUKQ96M69 825 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 PLEKHA3Q9HB20 300 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 FGFR1OP2Q9NVK5 253 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 MRM2Q9UI43 246 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
CTDNEP1-202ENST00000570380 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 A0A1W2PN81 502 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 SHISA3A0PJX4 238 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 IZUMO1RA6ND01 250 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 H0Y980 276 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 RPP14O95059 124 aaKnown RBP7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 HMGN1P05114 100 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 HSD17B1P14061 328 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 CHRNA7P36544 502 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 MAGEA2P43356 314 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 RSBN1Q5VWQ0 802 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 IL34Q6ZMJ4 242 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 LINC00311Q8N616 119 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR10G2Q8NGC3 310 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 TMEM106AQ96A25 262 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 SPACA5Q96QH8 159 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 FEVQ99581 238 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 MYRFQ9Y2G1 1151 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 FBXO7Q9Y3I1 522 aa7.93□□□□□ -1.14
CTDNEP1-202ENST00000570380 SAMHD1Q9Y3Z3 626 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms