RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 HILPDAQ9Y5L2 63 aa10.52□□□□□ -0.73
CNOT1-220ENST00000569916 A0A087X0M5 115 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 A0A1B0GX30 115 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 IL1AP01583 271 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 HTR1DP28221 377 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 RAB13P51153 203 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 DYNLT3P51808 116 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 LIPKQ5VXJ0 399 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 SLC35E4Q6ICL7 350 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 LIAT1Q6ZQX7 453 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 PRSS48Q7RTY5 328 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 LRRTM1Q86UE6 522 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 RTN4RL2Q86UN3 420 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF596Q8TC21 504 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 MRGPRDQ8TDS7 321 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 UFD1Q92890 307 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 MRPS24Q96EL2 167 aaKnown RBP10.51□□□□□ -0.73
CNOT1-220ENST00000569916 CITED1Q99966 193 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 UQCC2Q9BRT2 126 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 LINC00574Q9H8X3 128 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 RAB26Q9ULW5 256 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
CNOT1-220ENST00000569916 NPIPB11E5RHQ5 1161 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 SSTR5P35346 364 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 MLLT11Q13015 90 aaPredicted RBP10.5□□□□□ -0.73
CNOT1-220ENST00000569916 TPBGQ13641 420 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 HLA-DRB5Q30154 266 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 RBM48Q5RL73 367 aaKnown RBP10.5□□□□□ -0.73
CNOT1-220ENST00000569916 PRR31Q5SQ13 230 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 ATAD3CQ5T2N8 411 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 BRICD5Q6PL45 260 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 CCBE1Q6UXH8 406 aaPredicted RBP10.5□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 TMEM104Q8NE00 496 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 PHYHIPQ92561 330 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 CCDC90BQ9GZT6 254 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 BANF2Q9H503 90 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF696Q9H7X3 374 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 TCF7L1Q9HCS4 588 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 RAB18Q9NP72 206 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 ISYNA1Q9NPH2 558 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 ABCB10Q9NRK6 738 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 RCC2Q9P258 522 aaKnown RBP10.5□□□□□ -0.73
CNOT1-220ENST00000569916 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
CNOT1-220ENST00000569916 TRAV39A0A0B4J263 110 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 TMEM30CPA0ZSE6 113 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 A6NDX4 124 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 UCHL1P09936 223 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 HSMCR30P0CW71 290 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 MGMTP16455 207 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 NFYBP25208 207 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 GABRA5P31644 462 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 VHLP40337 213 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 MAP2K4P45985 399 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 RPS25P62851 125 aaKnown RBP10.49□□□□□ -0.73
CNOT1-220ENST00000569916 TBCEQ15813 527 aaPredicted RBP10.49□□□□□ -0.73
CNOT1-220ENST00000569916 HSD17B12Q53GQ0 312 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 TMEM91Q6ZNR0 172 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 CEACAM19Q7Z692 300 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 TMEM203Q969S6 136 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 Q96M66 194 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 IDI2-AS1Q9NZ38 188 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 FBLN5Q9UBX5 448 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A10PA6NDY2 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A18PA6NE21 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A16PA6NEW6 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A20PA6NIJ5 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A7PA6NKC0 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A22PA8MWA6 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A12PA8MX19 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A23PA8MXZ1 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 BUB1B-PAK6H3BSN5 160 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 F2RL2O00254 374 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 CRTAPO75718 401 aaPredicted RBP10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A13PP0C7W8 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM90A24PP0C7X0 464 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 CPEP16870 476 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 SRMP19623 302 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 KIR2DS4P43632 304 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 EFNB2P52799 333 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 C1orf100Q5SVJ3 147 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF497Q6ZNH5 498 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 TMEM219Q86XT9 240 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 OR9G1Q8NH87 305 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 RFESDQ8TAC1 157 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 NEK7Q8TDX7 302 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 FAM46BQ96A09 425 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 CYYR1Q96J86 154 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 MGLLQ99685 303 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 SELENOIQ9C0D9 397 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms