RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FAM90A12PA8MX19 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A5PA8MXJ8 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A23PA8MXZ1 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 H3BUX3 64 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A15PP0C7V4 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A13PP0C7W8 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A14PP0C7W9 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A24PP0C7X0 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 UBBP0CG47 229 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 CD37P11049 281 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 MGMTP16455 207 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 OMGP23515 440 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 GABRA5P31644 462 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 C17orf58Q2M2W7 97 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 LRRC75BQ2VPJ9 315 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 PRAMEF5Q5TYX0 476 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 SVOPQ8N4V2 548 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 SELENOIQ9C0D9 397 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 BANF2Q9H503 90 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 MMP24Q9Y5R2 645 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 POM121CA8CG34 1229 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 H3BUI4 141 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 CRTAPO75718 401 aaPredicted RBP11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 NDUFA7O95182 113 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 PAX6P26367 422 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 GLP1RP43220 463 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 RAG2P55895 527 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 RELBQ01201 579 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 FABP5Q01469 135 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 RBM39Q14498 530 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 SSX2Q16385 188 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 TMEM104Q8NE00 496 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 NEK7Q8TDX7 302 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 CST11Q9H112 138 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 BEX1Q9HBH7 125 aa11.19□□□□□ -0.62
HERPUD1-218ENST00000569569 A0A087X0M5 115 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 A0A1B0GX30 115 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 TMEM30CPA0ZSE6 113 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 VGLL3A8MV65 326 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 MCRIP1C9JLW8 97 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 GZMHP20718 246 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 HTR1DP28221 377 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 HTR2CP28335 458 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 CD34P28906 385 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 GDNFP39905 211 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 LDLRAD2Q5SZI1 272 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 BAIAP2L2Q6UXY1 529 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 NDNFQ8TB73 568 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 MRGPRDQ8TDS7 321 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 KIRREL1Q96J84 757 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 Q96M66 194 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 LINC00574Q9H8X3 128 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 CALYQ9NYX4 217 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 RCC2Q9P258 522 aaKnown RBP11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 PEX16Q9Y5Y5 336 aa11.18□□□□□ -0.62
HERPUD1-218ENST00000569569 NPIPB11E5RHQ5 1161 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 TOR1AO14656 332 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 SLC22A1O15245 554 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 MPIG6BO95866 241 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 IL1AP01583 271 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 GLAP06280 429 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 VSIG8P0DPA2 414 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 FUT3P21217 361 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 NFYBP25208 207 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 PRRX1P54821 245 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM189A2Q15884 450 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 SSX1Q16384 188 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 LY6EQ16553 131 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 RAB12Q6IQ22 244 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 OR6M1Q8NGM8 313 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 PIFOQ8TCI5 191 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM46BQ96A09 425 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 CREB3L1Q96BA8 519 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 ABCB10Q9NRK6 738 aa11.17□□□□□ -0.62
HERPUD1-218ENST00000569569 DPM3Q9P2X0 92 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms