RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 TAS2R8Q9NYW2 309 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 PITPNC1Q9UKF7 332 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 TRAV6A0A075B6T7 132 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 A0A0B4J2E0 115 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 A0A1B0GX12 115 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 UBE2QL1A1L167 161 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 UNC119BA6NIH7 251 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 RIIAD1A6NNX1 92 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 MCIDASD6RGH6 385 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 PRR23D1E9PI22 279 aaPredicted RBP8.92□□□□□ -0.98
CDH3-208ENST00000569036 AIPO00170 330 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 LANCL1O43813 399 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 LY6G6CO95867 125 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 PRR23D2P0DMB1 279 aaPredicted RBP8.92□□□□□ -0.98
CDH3-208ENST00000569036 ATF4P18848 351 aaPredicted RBP8.92□□□□□ -0.98
CDH3-208ENST00000569036 BLVRAP53004 296 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 PRSS12P56730 875 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 RPL23AP62750 156 aaKnown RBP8.92□□□□□ -0.98
CDH3-208ENST00000569036 ZNF273Q14593 569 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 ZNF74Q16587 644 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 WDR38Q5JTN6 314 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 SLC25A47Q6Q0C1 308 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 TMPRSS11FQ6ZWK6 438 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 CEACAM19Q7Z692 300 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 GCSAMQ8N6F7 178 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 RPS4Y2Q8TD47 263 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 RASD2Q96D21 266 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 SMIM19Q96E16 107 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 FAM46AQ96IP4 442 aaKnown RBP8.92□□□□□ -0.98
CDH3-208ENST00000569036 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 RERGLQ9H628 205 aa8.92□□□□□ -0.98
CDH3-208ENST00000569036 TRAPPC13A5PLN9 417 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 MPTX1A8MV57 137 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 J3QW42 95 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 BHLHE40O14503 412 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 PTBP3O95758 552 aaKnown RBP8.91□□□□□ -0.98
CDH3-208ENST00000569036 CH25HO95992 272 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 SELLP14151 372 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ZNF3P17036 446 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 CXCL3P19876 107 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 NFYAP23511 347 aaPredicted RBP8.91□□□□□ -0.98
CDH3-208ENST00000569036 S100A11P31949 105 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 GDNFP39905 211 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ECH1Q13011 328 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ACSM3Q53FZ2 586 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ZNF626Q68DY1 528 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 RPL22L1Q6P5R6 122 aaKnown RBP8.91□□□□□ -0.98
CDH3-208ENST00000569036 FOXL2NBQ6ZUU3 175 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 SYT9Q86SS6 491 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 NR2C2APQ86WQ0 139 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 CPOQ8IVL8 374 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ZFP41Q8N8Y5 198 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 OR5D13Q8NGL4 314 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 FANK1Q8TC84 345 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 PGLYRP3Q96LB9 341 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 MCHR1Q99705 422 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 WDR76Q9H967 626 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 NRIP3Q9NQ35 241 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 C1orf123Q9NWV4 160 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 KCNK7Q9Y2U2 307 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
CDH3-208ENST00000569036 ANKRD20A5PA0PJZ0 165 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 NUDT19A8MXV4 375 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 G3V3Q6 166 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 SGCEO43556 437 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 NDUFB3O43676 98 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 NDUFB6O95139 128 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 NMBP08949 121 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR2T7P0C7T2 308 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 UBBP0CG47 229 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 UBCP0CG48 685 aaKnown RBP8.9□□□□□ -0.98
CDH3-208ENST00000569036 RPA2P15927 270 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 RBM34P42696 430 aaKnown RBP8.9□□□□□ -0.98
CDH3-208ENST00000569036 ZP1P60852 638 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 RPS27AP62979 156 aaKnown RBP8.9□□□□□ -0.98
CDH3-208ENST00000569036 GK2Q14410 553 aaPredicted RBP8.9□□□□□ -0.98
CDH3-208ENST00000569036 CDK5R1Q15078 307 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR1Q1Q15612 314 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 SLC35D3Q5M8T2 416 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 PXDC1Q5TGL8 231 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 LIN54Q6MZP7 749 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 LPCAT3Q6P1A2 487 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 UQCC3Q6UW78 93 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 ZNF826PQ6ZT77 177 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 SLC36A1Q7Z2H8 476 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR2W3Q7Z3T1 314 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 NRMQ8IXM6 262 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
CDH3-208ENST00000569036 BVESQ8NE79 360 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR5L1Q8NGL2 311 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR2T27Q8NH04 317 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 FCAMRQ8WWV6 532 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 PHYHIPLQ96FC7 376 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 OR52D1Q9H346 318 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 MGAT4CQ9UBM8 478 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 PRELID3BQ9Y3B1 194 aa8.9□□□□□ -0.98
CDH3-208ENST00000569036 SMIM30A4D0T7 59 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 SEC14L6B5MCN3 397 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms