RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SRMP19623 302 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 GZMHP20718 246 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 OMGP23515 440 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 CDK2P24941 298 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 GDNFP39905 211 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 SNU13P55769 128 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 QRFPP83859 136 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 SCN1BQ07699 218 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 INSL4Q14641 139 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 PAN3Q58A45 887 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 SIGIRRQ6IA17 410 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 IZUMO2Q6UXV1 221 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 ABHD12Q8N2K0 398 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 C8orf31Q8N9H6 132 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 SUMF2Q8NBJ7 301 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 OR10K1Q8NGX5 313 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 Q96M66 194 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 NR1H4Q96RI1 486 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 NKX3-1Q99801 234 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 DPCDQ9BVM2 203 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 YTHDF1Q9BYJ9 559 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 SPACA1Q9HBV2 294 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 RAB18Q9NP72 206 aa6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 TET2Q6N021 2002 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-205ENST00000568129 PNMA8CA0A1B0GUJ8 204 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 FAM90A9PA6NNJ1 464 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 OOSP1A8MZH6 123 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 BUB1B-PAK6H3BSN5 160 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 H3BUI4 141 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 SLC22A1O15245 554 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 ORC5O43913 435 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 CA11O75493 328 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 IL1AP01583 271 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MT-ND4P03905 459 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MAS1P04201 325 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 SERPINA2P20848 420 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 COX7A1P24310 79 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 PSMA1P25786 263 aaKnown RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 HTR1DP28221 377 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 VHLP40337 213 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 GABARAPL2P60520 117 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 ATXN7L3Q14CW9 347 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MED22Q15528 200 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 TBCEQ15813 527 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 HLA-DRB5Q30154 266 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 Q3ZCU0 254 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 SLC22A6Q4U2R8 563 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 UTF1Q5T230 341 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 FAM27D1Q5T7N8 215 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 DHRS7BQ6IAN0 325 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 CD200R1LQ6Q8B3 271 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 GLIPR1L1Q6UWM5 242 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 BAIAP2L2Q6UXY1 529 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 ZNF497Q6ZNH5 498 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 TMEM104Q8NE00 496 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 OR52M1Q8NGK5 317 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 OR13A1Q8NGR1 328 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 UFD1Q92890 307 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MUL1Q969V5 352 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 CREB3L1Q96BA8 519 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 S100A13Q99584 98 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 TM2D1Q9BX74 207 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 FAM192AQ9GZU8 254 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 ZNF286AQ9HBT8 521 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 TNFRSF19Q9NS68 423 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 DPM3Q9P2X0 92 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 KIF25Q9UIL4 384 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 TCF19Q9Y242 345 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
HDGFL3-205ENST00000568129 MEX3AA1L020 520 aaKnown RBP6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 TMEM14DPA8MWL7 114 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 J3QR06 171 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 HAX1O00165 279 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 F2RL2O00254 374 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 CHST1O43916 411 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 OR7C1O76099 320 aaPredicted RBP6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 UBBP0CG47 229 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 MGMTP16455 207 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 GALP22466 123 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 PAX6P26367 422 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 EFNB2P52799 333 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 PRRX1P54821 245 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 LOXL3P58215 753 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 EMX1Q04741 257 aaPredicted RBP6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 HABP2Q14520 560 aaPredicted RBP6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 SSX2Q16385 188 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 PRAMEF5Q5TYX0 476 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 LIPKQ5VXJ0 399 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 GLT8D1Q68CQ7 371 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 C11orf88Q6PI97 169 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 CEACAM19Q7Z692 300 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 TRAPPC6BQ86SZ2 158 aa6.58□□□□□ -1.36
HDGFL3-205ENST00000568129 ZNF554Q86TJ5 538 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms