RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 UTP4Q969X6 686 aaKnown RBP12.11□□□□□ -0.47
PALB2-205ENST00000567003 NRBF2Q96F24 287 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 TCRBV3S1A0A5B6 114 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 HSD17B6O14756 317 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 FAM107AO95990 144 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 TMEM244Q5VVB8 128 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
PALB2-205ENST00000567003 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 Q8N9W7 124 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 Q8NFD4 153 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 UBALD1Q8TB05 177 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 FRRS1LQ9P0K9 344 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 ZNF581Q9P0T4 197 aa12.1□□□□□ -0.47
PALB2-205ENST00000567003 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
PALB2-205ENST00000567003 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 ATP6V1E1P36543 226 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 POLR2IP36954 125 aaKnown RBP12.09□□□□□ -0.47
PALB2-205ENST00000567003 CDX1P47902 265 aaPredicted RBP12.09□□□□□ -0.47
PALB2-205ENST00000567003 ZP1P60852 638 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 FOXE3Q13461 319 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 FHL3Q13643 280 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
PALB2-205ENST00000567003 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 TGIF2LXQ8IUE1 241 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 Q8N6K4 173 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 OR13C3Q8NGS6 347 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 ABCG5Q9H222 651 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 MYRFQ9Y2G1 1151 aa12.09□□□□□ -0.47
PALB2-205ENST00000567003 ALMS1Q8TCU4 4167 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
PALB2-205ENST00000567003 NPIPB11E5RHQ5 1161 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 CCRL2O00421 344 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 C21orf33P30042 268 aaPredicted RBP12.08□□□□□ -0.48
PALB2-205ENST00000567003 CFHR3Q02985 330 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 ZNF816Q0VGE8 651 aaPredicted RBP12.08□□□□□ -0.48
PALB2-205ENST00000567003 EBI3Q14213 229 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 IZUMO1Q8IYV9 350 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 RNF152Q8N8N0 203 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 ZNF565Q8N9K5 539 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 C4orf3Q8WVX3 66 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 EME1Q96AY2 570 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 LINC00574Q9H8X3 128 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 PLSCR3Q9NRY6 295 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 LIN7CQ9NUP9 197 aaKnown RBP12.08□□□□□ -0.48
PALB2-205ENST00000567003 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
PALB2-205ENST00000567003 LCE6AA0A183 80 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 MT-ND2P03891 347 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 ISG15P05161 165 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 ELANEP08246 267 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 HCKP08631 526 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 LYL1P12980 280 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 HOXB6P17509 224 aaKnown RBP12.07□□□□□ -0.48
PALB2-205ENST00000567003 PIGYQ3MUY2 71 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 OR11H1Q8NG94 326 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 OR10K1Q8NGX5 313 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 CNIH3Q8TBE1 160 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 ZCCHC4Q9H5U6 513 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 GNB4Q9HAV0 340 aa12.07□□□□□ -0.48
PALB2-205ENST00000567003 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
PALB2-205ENST00000567003 HTR1AP08908 422 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 MTNR1BP49286 362 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 KISS1Q15726 138 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 ZNF691Q5VV52 312 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 OR2T10Q8NGZ9 312 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 S1PR3Q99500 378 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 CIB1Q99828 191 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 POMPQ9Y244 141 aa12.06□□□□□ -0.48
PALB2-205ENST00000567003 OR4C45A6NMZ5 311 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 G3V2T6 193 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 SLC31A2O15432 143 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 MPZL2O60487 215 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 IGHG4P01861 327 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 FRMD6-AS1P0C7T7 363 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 VDAC1P21796 283 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 PSMB8P28062 276 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 F2RL1P55085 397 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 GNB1P62873 340 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 BARHL1Q9BZE3 327 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 KLK15Q9H2R5 256 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 RIBC2Q9H4K1 309 aa12.05□□□□□ -0.48
PALB2-205ENST00000567003 ISYNA1Q9NPH2 558 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms