RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FAM90A24PP0C7X0 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 DCKP27707 260 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 C21orf33P30042 268 aaPredicted RBP14.58□□□□□ -0.08
USB1-213ENST00000566292 MNDAP41218 407 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 DIAPH2-AS1Q14236 149 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 OR13C5Q8NGS8 318 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 RFESDQ8TAC1 157 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 RDH12Q96NR8 316 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 PSG11Q9UQ72 335 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 TRAV39A0A0B4J263 110 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 OGG1O15527 345 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 LALBAP00709 142 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 SSTR5P35346 364 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 KCNJ3P48549 501 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 LTC4SQ16873 150 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 DDI2Q5TDH0 399 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 TMPRSS11AQ6ZMR5 421 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 SUMF2Q8NBJ7 301 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 MYDGFQ969H8 173 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 TOMM40LQ969M1 308 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 RPEQ96AT9 228 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 PHF21AQ96BD5 680 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 DPCDQ9BVM2 203 aaPredicted RBP14.57□□□□□ -0.08
USB1-213ENST00000566292 IL36GQ9NZH8 169 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.57□□□□□ -0.08
USB1-213ENST00000566292 CLEC2DQ9UHP7 191 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 ING4Q9UNL4 249 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 ST3GAL6Q9Y274 331 aa14.57□□□□□ -0.08
USB1-213ENST00000566292 AMMECR1Q9Y4X0 333 aaPredicted RBP14.57□□□□□ -0.08
USB1-213ENST00000566292 A0A1W2PPI3 338 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 TCRBV4S1A1TA0A5B7 111 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 SNRNP70P08621 437 aaKnown RBP14.56□□□□□ -0.08
USB1-213ENST00000566292 RBM11P57052 281 aaKnown RBP14.56□□□□□ -0.08
USB1-213ENST00000566292 NHLRC3Q5JS37 347 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 C9orf152Q5JTZ5 239 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 REC114Q7Z4M0 266 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 THNSL2Q86YJ6 484 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 OSR2Q8N2R0 312 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 WFDC9Q8NEX5 89 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 OR56B4Q8NH76 319 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 SMIM19Q96E16 107 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 METTL9Q9H1A3 318 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 IFT22Q9H7X7 185 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 TMEM138Q9NPI0 162 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 PCDHB16Q9NRJ7 776 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 BABAM2Q9NXR7 383 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 DIMT1Q9UNQ2 313 aaKnown RBP14.56□□□□□ -0.08
USB1-213ENST00000566292 ZNF281Q9Y2X9 895 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 MOB4Q9Y3A3 225 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 TSSC4Q9Y5U2 329 aaPredicted RBP14.56□□□□□ -0.08
USB1-213ENST00000566292 HSPE1-MOB4S4R3N1 261 aa14.56□□□□□ -0.08
USB1-213ENST00000566292 TRBV5-5A0A0J9YX44 114 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 EBAG9O00559 213 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 GEMIN2O14893 280 aaKnown RBP14.55□□□□□ -0.08
USB1-213ENST00000566292 FAM106CPP0CH98 169 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 IGFBP3P17936 291 aaPredicted RBP14.55□□□□□ -0.08
USB1-213ENST00000566292 BDKRB2P30411 391 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 ZNF93P35789 620 aaPredicted RBP14.55□□□□□ -0.08
USB1-213ENST00000566292 GNG10P50151 68 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 PPP3R1P63098 170 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 DRAM1Q8N682 238 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 OR52N1Q8NH53 320 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 SGCDQ92629 289 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 NECAP2Q9NVZ3 263 aa14.55□□□□□ -0.08
USB1-213ENST00000566292 AURKAIP1Q9NWT8 199 aaPredicted RBP14.55□□□□□ -0.08
USB1-213ENST00000566292 EXOSC1Q9Y3B2 195 aaKnown RBP14.55□□□□□ -0.08
USB1-213ENST00000566292 A0A1W2PP11 408 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 A0A1W2PPE3 182 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 MAGEA13PA6NCF6 341 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 M0QZK8 103 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 OR7C1O76099 320 aaPredicted RBP14.54□□□□□ -0.08
USB1-213ENST00000566292 PF4V1P10720 104 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 IGLL1P15814 213 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 CD33P20138 364 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 SERPINA2P20848 420 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 MADCAM1Q13477 382 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 DMKNQ6E0U4 476 aaPredicted RBP14.54□□□□□ -0.08
USB1-213ENST00000566292 OR10A7Q8NGE5 316 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 OR4X2Q8NGF9 303 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 GHSRQ92847 366 aa14.54□□□□□ -0.08
USB1-213ENST00000566292 IRGMA1A4Y4 181 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 CSTBP04080 98 aaKnown RBP14.53□□□□□ -0.08
USB1-213ENST00000566292 RAB7AP51149 207 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 RPS11P62280 158 aaKnown RBP eCLIP14.53□□□□□ -0.08
USB1-213ENST00000566292 LRRC36Q1X8D7 754 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 FOXB2Q5VYV0 432 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 SLC16A12Q6ZSM3 486 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 ZFP41Q8N8Y5 198 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 ZNF485Q8NCK3 441 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 MRAPQ8TCY5 172 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 CYGBQ8WWM9 190 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 PGLYRP3Q96LB9 341 aa14.53□□□□□ -0.08
USB1-213ENST00000566292 ZNF184Q99676 751 aaPredicted RBP14.53□□□□□ -0.08
USB1-213ENST00000566292 TRAV8-7A0A075B6U6 113 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 TMEM30CPA0ZSE6 113 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 C15orf65H3BRN8 121 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 PIN1P1O15428 100 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 GPX5O75715 221 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 MYL12AP19105 171 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 ADARB1P78563 741 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms