RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ELF3P78545 371 aaPredicted RBP3□□□□□ -1.93
CNOT1-209ENST00000566240 CD164Q04900 197 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 PRKCDQ05655 676 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 SLAMF1Q13291 335 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 PMS2P3Q13401 168 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 FLOT2Q14254 428 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 ATP6AP1LQ52LC2 224 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 KLHL12Q53G59 568 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 KCTD16Q68DU8 428 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF880Q6PDB4 577 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 MORN3Q6PF18 240 aaPredicted RBP3□□□□□ -1.93
CNOT1-209ENST00000566240 FAM231DQ6ZW35 169 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 PRNTQ86SH4 94 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 PDPNQ86YL7 162 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF420Q8TAQ5 688 aaPredicted RBP3□□□□□ -1.93
CNOT1-209ENST00000566240 ZSCAN16Q9H4T2 348 aaPredicted RBP3□□□□□ -1.93
CNOT1-209ENST00000566240 INSIG2Q9Y5U4 225 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 MYO10Q9HD67 2058 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 DLEC1Q9Y238 1755 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 AKAP11Q9UKA4 1901 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 LRRC37AA6NMS7 1700 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 MYO5AQ9Y4I1 1855 aaKnown RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 TNRC6CQ9HCJ0 1690 aaKnown RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 BCL9LQ86UU0 1499 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 KIR2DS1A0A191URI9 304 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 BTNL10A8MVZ5 291 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 MKRN2OSH3BPM6 223 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 SULT1C2O00338 296 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 UPK2O00526 184 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 CRXO43186 299 aaPredicted RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV3-11P04433 115 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 CDK1P06493 297 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 CD28P10747 220 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 HTR2BP41595 481 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 LINC00315P59091 139 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 TPM4P67936 248 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 CEACAM21Q3KPI0 293 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 CLEC12AQ5QGZ9 265 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 UNQ9165/PRO28630Q6UXU0 137 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 SLC35G3Q8N808 338 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 FAM57AQ8TBR7 257 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 RORBQ92753 470 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 LLPHQ9BRT6 129 aaKnown RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 ASB7Q9H672 318 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 ZNHIT6Q9NWK9 470 aaKnown RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 ANKRD12Q6UB98 2062 aa2.99□□□□□ -1.93
CNOT1-209ENST00000566240 TNS1Q9HBL0 1735 aaKnown RBP2.99□□□□□ -1.93
CNOT1-209ENST00000566240 PCM1Q15154 2024 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 TCHHQ07283 1943 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 BAZ2AQ9UIF9 1905 aaKnown RBP2.98□□□□□ -1.93
CNOT1-209ENST00000566240 LOC389332A0A1B0GUA5 103 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 A0A1B0GX12 115 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 TMEM150BA6NC51 233 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF233A6NK53 670 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 CLDN34H7C241 214 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 M0QXV9 152 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 UBDO15205 165 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 MYO1DO94832 1006 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 OR2A4O95047 310 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 MSNP26038 577 aaKnown RBP2.98□□□□□ -1.93
CNOT1-209ENST00000566240 TEAD1P28347 426 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 GCLMP48507 274 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 TTPAP49638 278 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ACOT2P49753 483 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 BAXQ07812 192 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF616Q08AN1 781 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 BTN1A1Q13410 526 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 LINC00303Q3SY05 128 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF404Q494X3 552 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ACTBL2Q562R1 376 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 CLLU1OSQ5K130 101 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 STK40Q8N2I9 435 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 OSR2Q8N2R0 312 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 TMEM105Q8N8V8 129 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF738Q8NE65 137 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 UBA3Q8TBC4 463 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 RTN4IP1Q8WWV3 396 aaPredicted RBP2.98□□□□□ -1.93
CNOT1-209ENST00000566240 LRRC45Q96CN5 670 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 FMC1Q96HJ9 113 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 DERL3Q96Q80 235 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 OR2A7Q96R45 310 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 PITX2Q99697 317 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 MS4A8Q9BY19 250 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 DSN1Q9H410 356 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 SND1-IT1Q9HBX3 110 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 STX18Q9P2W9 335 aaKnown RBP2.98□□□□□ -1.93
CNOT1-209ENST00000566240 FOCADQ5VW36 1801 aa2.98□□□□□ -1.93
CNOT1-209ENST00000566240 MYH1P12882 1939 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 ABCB11O95342 1321 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF532Q9HCE3 1301 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 A0A1B0GTI1 187 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 SMLR1H3BR10 107 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 SNAP29O95721 258 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 SNRPAP09012 282 aaKnown RBP2.97□□□□□ -1.93
CNOT1-209ENST00000566240 AZU1P20160 251 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 NTF3P20783 257 aa2.97□□□□□ -1.93
CNOT1-209ENST00000566240 ADORA1P30542 326 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms