RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 OR4K15Q8NH41 348 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 PLPPR1Q8TBJ4 325 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 MRPL30Q8TCC3 161 aaKnown RBP6.45□□□□□ -1.38
CDH1-208ENST00000565810 NUDCD2Q8WVJ2 157 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 FCAMRQ8WWV6 532 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 DYRK2Q92630 601 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 COQ2Q96H96 371 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 DMRTB1Q96MA1 342 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 ABHD1Q96SE0 405 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 LPAR2Q9HBW0 351 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 IFT46Q9NQC8 304 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 KIF25Q9UIL4 384 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 RPUSD1Q9UJJ7 312 aaKnown RBP6.45□□□□□ -1.38
CDH1-208ENST00000565810 KCNK7Q9Y2U2 307 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 UBE2J1Q9Y385 318 aaPredicted RBP6.45□□□□□ -1.38
CDH1-208ENST00000565810 APCP25054 2843 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 CENPEQ02224 2701 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 TRBV6-6A0A0A6YYG2 114 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 TRAV20A0A0B4J274 112 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 A0A0G2JMP0 313 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 A0A0X1KG70 313 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 KIR2DS1A0A191URI9 304 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 GABARAPH6UMI1 98 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 SPINT2O43291 252 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 RBBP9O75884 186 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 NAPSAO96009 420 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 LPLP06858 475 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 PTHLHP12272 177 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ZFP36P26651 326 aaKnown RBP6.44□□□□□ -1.38
CDH1-208ENST00000565810 IL2RGP31785 369 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 KIR2DS4P43632 304 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 LCN2P80188 198 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ZNF846Q147U1 533 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 SRSF7Q16629 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDH1-208ENST00000565810 TMEM249Q2WGJ8 235 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 OLFML2AQ68BL7 652 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 CYB5R2Q6BCY4 276 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ZNF554Q86TJ5 538 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 RTN4RL2Q86UN3 420 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 GAPTQ8N292 157 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 FGFRL1Q8N441 504 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 GDPD1Q8N9F7 314 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 MAPK1IP1LQ8NDC0 245 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 OR4M2Q8NGB6 313 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 C8orf46Q8TAG6 207 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 MRGPRDQ8TDS7 321 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 GPX8Q8TED1 209 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 CORO2AQ92828 525 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ZNF714Q96N38 554 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 SOSTQ9BQB4 213 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 OCSTAMPQ9BR26 566 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 HDHD3Q9BSH5 251 aaPredicted RBP6.44□□□□□ -1.38
CDH1-208ENST00000565810 ST6GALNAC5Q9BVH7 336 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 WDR12Q9GZL7 423 aaKnown RBP6.44□□□□□ -1.38
CDH1-208ENST00000565810 GAL3ST2Q9H3Q3 398 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ZNF286AQ9HBT8 521 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 Q9N2K0 584 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 C19orf12Q9NSK7 152 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 TAS2R3Q9NYW6 316 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 OPN4Q9UHM6 478 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 ELF5Q9UKW6 265 aaPredicted RBP6.44□□□□□ -1.38
CDH1-208ENST00000565810 POLR3KQ9Y2Y1 108 aaPredicted RBP6.44□□□□□ -1.38
CDH1-208ENST00000565810 LINC00312Q9Y6C7 94 aa6.44□□□□□ -1.38
CDH1-208ENST00000565810 POLQO75417 2590 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 A0A096LNT2 108 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 TRAV39A0A0B4J263 110 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 IGHV2-70DA0A0C4DH43 119 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 KBTBD11-OT1A0A1B0GTJ5 212 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 MEIS3P1A6NDR6 274 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 ZNF729A6NN14 1252 aaPredicted RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 KIAA1324LA8MWY0 1029 aaPredicted RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 TRDCB7Z8K6 153 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 C22orf46C9J442 243 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 FAM157AC9JC47 383 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 ORC5O43913 435 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 TGFAP01135 160 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 MSMBP08118 114 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 FCGR3AP08637 254 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 GSTT2BP0CG30 244 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 ZNF728P0DKX0 622 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 RCC1P18754 421 aaPredicted RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 GATA3P23771 443 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 INPP1P49441 399 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 ACTBP60709 375 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 ACTG1P63261 375 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 GUCA2AQ02747 115 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 SSBP1Q04837 148 aaKnown RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 LSAMPQ13449 338 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 CR1LQ2VPA4 569 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 RNASE12Q5GAN4 147 aaKnown RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
CDH1-208ENST00000565810 TRIQKQ629K1 86 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 TMEM200BQ69YZ2 307 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 ZNF880Q6PDB4 577 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 GLCCI1Q86VQ1 547 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 HOGA1Q86XE5 327 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 Q8N402 240 aa6.43□□□□□ -1.38
CDH1-208ENST00000565810 LY6G5BQ8NDX9 201 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms