RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NUBP2Q9Y5Y2 271 aa15.96■□□□□ 0.15
CSPG4P13-201ENST00000565545 IGHV3OR15-7A0A075B7D8 119 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 HSPB6O14558 160 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 IFNA6P05013 189 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 FCER2P06734 321 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 HRH1P35367 487 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 GABRA2P47869 451 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR3A3P47888 321 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 CEBPDP49716 269 aaPredicted RBP15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 GRK1Q15835 563 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 KCNJ8Q15842 424 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 ATPAF1Q5TC12 328 aaPredicted RBP15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 SLC35E4Q6ICL7 350 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF880Q6PDB4 577 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF497Q6ZNH5 498 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 ARRDC1Q8N5I2 433 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR5T2Q8NGG2 359 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 MRPL30Q8TCC3 161 aaKnown RBP15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 CREB3L1Q96BA8 519 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 PRRT1Q99946 306 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 TINAGL1Q9GZM7 467 aaPredicted RBP15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 PPA2Q9H2U2 334 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF665Q9H7R5 613 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 PLEKHF2Q9H8W4 249 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 Q9N2K0 584 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 SLC2A8Q9NY64 477 aa15.95■□□□□ 0.14
CSPG4P13-201ENST00000565545 KIR2DS1A0A191URI9 304 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 TMEM82A0PJX8 343 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 TMEM30CPA0ZSE6 113 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 M0QYG6 137 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 NDUFA2O43678 99 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 PSPNO60542 156 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF737O75373 536 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 TCRBP04435 133 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 AMY2AP04746 511 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF735P0CB33 412 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 KIR2DS4P43632 304 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR3A1P47881 315 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 KIR2DS1Q14954 304 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 SFRP4Q6FHJ7 346 aaPredicted RBP15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 C17orf107Q6ZR85 190 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 BTN2A1Q7KYR7 527 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 TMEM17Q86X19 198 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR4D10Q8NGI6 311 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR5D13Q8NGL4 314 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 FAM234AQ9H0X4 552 aa15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 MYOZ1Q9NP98 299 aaPredicted RBP15.94■□□□□ 0.14
CSPG4P13-201ENST00000565545 NKX6-3A6NJ46 265 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 PMP2P02689 132 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 RAG2P55895 527 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 ARPC4P59998 168 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 HOXA4Q00056 320 aaPredicted RBP15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 CDK10Q15131 360 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 FAM201AQ5SY85 155 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF788Q6ZQV5 615 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 ASCC1Q8N9N2 400 aaKnown RBP15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR51S1Q8NGJ8 323 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 OR56B4Q8NH76 319 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 PLPPR1Q8TBJ4 325 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 SLC25A21Q9BQT8 299 aaPredicted RBP15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 MARVELD1Q9BSK0 173 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 SHARPINQ9H0F6 387 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 NCOR1P1Q9H4R4 102 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 NECAP2Q9NVZ3 263 aa15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 BEX4Q9NWD9 120 aaPredicted RBP15.93■□□□□ 0.14
CSPG4P13-201ENST00000565545 DSCAMO60469 2012 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 FUOMA2VDF0 154 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 TRDCB7Z8K6 153 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 K7N7A8 449 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 MGST3O14880 152 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 NDUFB6O95139 128 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 CTXN2P0C2S0 81 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 CCR6P51684 374 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 BTG1P62324 171 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 RBMS2Q15434 407 aaKnown RBP15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 RSBN1Q5VWQ0 802 aaPredicted RBP15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 FAAP20Q6NZ36 180 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 OVCH2Q7RTZ1 564 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 PEG10Q86TG7 708 aaKnown RBP15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 MAFIPQ8WZ33 124 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 MED30Q96HR3 178 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 SLC6A7Q99884 636 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 MMP28Q9H239 520 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 DCAF16Q9NXF7 216 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 METRNQ9UJH8 293 aa15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 ZNF469Q96JG9 3925 aaPredicted RBP15.92■□□□□ 0.14
CSPG4P13-201ENST00000565545 IGKV1D-8A0A087WSZ0 117 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 COL8A2P25067 703 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 IL13RA1P78552 427 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 ATXN7L3Q14CW9 347 aaPredicted RBP15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 SLC36A1Q7Z2H8 476 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 DEFB108BQ8NET1 73 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 GAFA1Q96PS6 74 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 MBNL3Q9NUK0 354 aaKnown RBP15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 EHFQ9NZC4 300 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 TRAPPC2LQ9UL33 140 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 MAB21L2Q9Y586 359 aa15.91■□□□□ 0.14
CSPG4P13-201ENST00000565545 INMT-MINDY4F8WBC2 141 aa15.9■□□□□ 0.14
CSPG4P13-201ENST00000565545 TNFRSF13BO14836 293 aaPredicted RBP15.9■□□□□ 0.14
CSPG4P13-201ENST00000565545 SIGLEC5O15389 551 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms