RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SORL1Q92673 2214 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 A0A087WXM4 84 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 LOC107986453A0A1B0GWG9 222 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 OR5B21A6NL26 309 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 RFPL4AA6NLU0 287 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 E9PI62 339 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 RFPL4AL1F8VTS6 287 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GPX5O75715 221 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 MT-ND2P03891 347 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 FAM106CPP0CH98 169 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GP9P14770 177 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 CPEP16870 476 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 CELP19835 753 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 ACKR3P25106 362 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PSMA1P25786 263 aaKnown RBP7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 MAPK3P27361 379 aaPredicted RBP7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 RANBP1P43487 201 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 FUT6P51993 359 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GTF2A1P52655 376 aaPredicted RBP7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 DLX6P56179 175 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GNG3P63215 75 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PRDX4Q13162 271 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PNLIPRP3Q17RR3 467 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 DEFB136Q30KP8 78 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF773Q6PK81 442 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF367Q7RTV3 350 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 ZDHHC23Q8IYP9 409 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 SPARTQ8N0X7 666 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PARP16Q8N5Y8 322 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 DNAAF1Q8NEP3 725 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 OR13C3Q8NGS6 347 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 OR5P3Q8WZ94 311 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PHYHIPQ92561 330 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GHSRQ92847 366 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 MGLLQ99685 303 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 PDCD1LG2Q9BQ51 273 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 GON7Q9BXV9 100 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 VCX3AQ9NNX9 186 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 ACOT13Q9NPJ3 140 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 SLC7A11Q9UPY5 501 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 DHDHQ9UQ10 334 aa7.09□□□□□ -1.27
VPS9D1-205ENST00000565452 TRIM64CA6NLI5 447 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ZNF850A8MQ14 1090 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CCRL2O00421 344 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 LALBAP00709 142 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 TK1P04183 234 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 SPNP16150 400 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ZNF20P17024 532 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 GALP22466 123 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 PRKACBP22694 351 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ANOS1P23352 680 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 MTNR1BP49286 362 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ODF4Q2M2E3 257 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 Q499Y3 187 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CXorf66Q5JRM2 361 aaPredicted RBP7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 UBE2UQ5VVX9 321 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 MOB3CQ70IA8 216 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ZNF573Q86YE8 665 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 FOXRED2Q8IWF2 684 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CDH26Q8IXH8 852 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 RDH10Q8IZV5 341 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 UFD1Q92890 307 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ST6GALNAC6Q969X2 333 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 FGGYQ96C11 551 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CPNE2Q96FN4 548 aaPredicted RBP7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CLEC7AQ9BXN2 247 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 CHST5Q9GZS9 411 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 ZCCHC4Q9H5U6 513 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 PPP1R3EQ9H7J1 279 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
VPS9D1-205ENST00000565452 IGHV2-26A0A0B4J1V2 119 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 TRBV5-5A0A0J9YX44 114 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 A8MZ25 164 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 LEUTXA8MZ59 168 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 MAGEB3O15480 346 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 OCM2P0CE71 109 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 ATF1P18846 271 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 MNDAP41218 407 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 POU3F4P49335 361 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 RBP2P50120 134 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 ATP1B3P54709 279 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 SMIM21Q3B7S5 101 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 SYT6Q5T7P8 510 aaPredicted RBP7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 PLCXD3Q63HM9 321 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 XAF1Q6GPH4 301 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 TSPAN14Q8NG11 270 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 OR11H1Q8NG94 326 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 TSEN15Q8WW01 171 aaKnown RBP7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 TMEM106AQ96A25 262 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 CREB3L1Q96BA8 519 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 SPSB1Q96BD6 273 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 PGLYRP3Q96LB9 341 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 ZNF714Q96N38 554 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 GHITMQ9H3K2 345 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 C19orf73Q9NVV2 129 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 CKLFQ9UBR5 152 aa7.07□□□□□ -1.28
VPS9D1-205ENST00000565452 LINC00527Q9UJ94 153 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms