RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 HSPB6O14558 160 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 HTR3BO95264 441 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 LPLP06858 475 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 CD24P25063 80 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 ZNF93P35789 620 aaPredicted RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 SOX2P48431 317 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 GPR176Q14439 515 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 RSBN1Q5VWQ0 802 aaPredicted RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 OSR2Q8N2R0 312 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 OR51A2Q8NGJ7 313 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 OR13A1Q8NGR1 328 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 SMIM19Q96E16 107 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 DPCDQ9BVM2 203 aaPredicted RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 CHCHD3Q9NX63 227 aaKnown RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 CKLFQ9UBR5 152 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 ST3GAL6Q9Y274 331 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 MOB4Q9Y3A3 225 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 EXOSC1Q9Y3B2 195 aaKnown RBP11.96□□□□□ -0.49
SPG7-210ENST00000564409 HSPE1-MOB4S4R3N1 261 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 GPX5O75715 221 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 AMY1AP04745 511 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 AMY2AP04746 511 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 PF4V1P10720 104 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 CD33P20138 364 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 BDKRB2P30411 391 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 ETV1P50549 477 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
SPG7-210ENST00000564409 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 PIGYQ3MUY2 71 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 TTC23Q5W5X9 447 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 SETD9Q8NE22 299 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 OR52M1Q8NGK5 317 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 OR52N1Q8NH53 320 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 SGCDQ92629 289 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
SPG7-210ENST00000564409 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 PIN1P1O15428 100 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 FGF16O43320 207 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 OR7C1O76099 320 aaPredicted RBP11.94□□□□□ -0.5
SPG7-210ENST00000564409 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
SPG7-210ENST00000564409 BAG2O95816 211 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 CLIC3O95833 236 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 LOXL3P58215 753 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 RIPK1Q13546 671 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 SMN1Q16637 294 aaKnown RBP11.94□□□□□ -0.5
SPG7-210ENST00000564409 Q3ZCU0 254 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 DDI2Q5TDH0 399 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 Q6ZPA2 131 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 CDH26Q8IXH8 852 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 C8orf31Q8N9H6 132 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 SUMF2Q8NBJ7 301 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 PLPPR1Q8TBJ4 325 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 MRPS24Q96EL2 167 aaKnown RBP11.94□□□□□ -0.5
SPG7-210ENST00000564409 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 ING4Q9UNL4 249 aa11.94□□□□□ -0.5
SPG7-210ENST00000564409 A0A1W2PPI3 338 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 A0A1W2PRX2 142 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 ORC5O43913 435 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 CDRT1O95170 752 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 PF4P02776 101 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 GTF2F2P13984 249 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 SLC6A1P30531 599 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 TAS2R43P59537 309 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 SLC35A2P78381 396 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 Q499Y3 187 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 TCTEX1D4Q5JR98 221 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 XAF1Q6GPH4 301 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 OR10K1Q8NGX5 313 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 OR10X1Q8NGY0 326 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 OR56B4Q8NH76 319 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 CHPT1Q8WUD6 406 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 THRSPQ92748 146 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 GHSRQ92847 366 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 MYDGFQ969H8 173 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 PHF21AQ96BD5 680 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 TMEM80Q96HE8 168 aa11.93□□□□□ -0.5
SPG7-210ENST00000564409 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
SPG7-210ENST00000564409 TRBV5-5A0A0J9YX44 114 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 CCRL2O00421 344 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 GAPDHP04406 335 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms