RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FOXRED1Q96CU9 486 aaPredicted RBP12.74□□□□□ -0.37
RNF40-205ENST00000563909 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
RNF40-205ENST00000563909 PPIL3Q9H2H8 161 aaKnown RBP12.74□□□□□ -0.37
RNF40-205ENST00000563909 RHOFQ9HBH0 211 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 EXOSC4Q9NPD3 245 aaKnown RBP12.74□□□□□ -0.37
RNF40-205ENST00000563909 SNTG1Q9NSN8 517 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 TCF19Q9Y242 345 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 GSTK1Q9Y2Q3 226 aa12.74□□□□□ -0.37
RNF40-205ENST00000563909 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
RNF40-205ENST00000563909 FGF9P31371 208 aaPredicted RBP12.73□□□□□ -0.37
RNF40-205ENST00000563909 ERVK11-1P61568 191 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 KHDC1LQ5JSQ8 128 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 TNFAIP8L1Q8WVP5 186 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 ZNF488Q96MN9 340 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 S100A13Q99584 98 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 HES4Q9HCC6 221 aa12.73□□□□□ -0.37
RNF40-205ENST00000563909 SLC25A10Q9UBX3 287 aaPredicted RBP12.73□□□□□ -0.37
RNF40-205ENST00000563909 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 A6NDX4 124 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 NKX6-3A6NJ46 265 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 PDCD5O14737 125 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 KDM4BO94953 1096 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 NDUFB7P17568 137 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 BCL3P20749 454 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 MYL9P24844 172 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 PTGFRP43088 359 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 PSMD7P51665 324 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 DGUOKQ16854 277 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 C22orf42Q6IC83 251 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 MED30Q96HR3 178 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 FAM192AQ9GZU8 254 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 OR51E2Q9H255 320 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
RNF40-205ENST00000563909 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
RNF40-205ENST00000563909 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 OR2AT4A6NND4 320 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 VGLL3A8MV65 326 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 RAMP3O60896 148 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 TFF1P04155 84 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 PSG2P11465 335 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 GADD45AP24522 165 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 RANBP1P43487 201 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 OR3A4PP47883 348 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 NPBWR2P48146 333 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 LGALS4P56470 323 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 FAM58AQ8N1B3 248 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 BATF2Q8N1L9 274 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 EMG1Q92979 244 aaKnown RBP12.71□□□□□ -0.37
RNF40-205ENST00000563909 GAFA1Q96PS6 74 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 PRR25Q96S07 402 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 CHCHD6Q9BRQ6 235 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 METTL9Q9H1A3 318 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 ELL3Q9HB65 397 aaPredicted RBP12.71□□□□□ -0.37
RNF40-205ENST00000563909 PITPNC1Q9UKF7 332 aa12.71□□□□□ -0.37
RNF40-205ENST00000563909 ZNF780AO75290 641 aaPredicted RBP12.7□□□□□ -0.38
RNF40-205ENST00000563909 CD37P11049 281 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 GABRA2P47869 451 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 MTNR1BP49286 362 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 CAV3P56539 151 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 GPR176Q14439 515 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 RSU1Q15404 277 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 OR13F1Q8NGS4 319 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 ANGPTL6Q8NI99 470 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 ABCB10Q9NRK6 738 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 RBFOX1Q9NWB1 397 aaKnown RBP12.7□□□□□ -0.38
RNF40-205ENST00000563909 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 GHRLQ9UBU3 117 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
RNF40-205ENST00000563909 MRPS28Q9Y2Q9 187 aaKnown RBP12.7□□□□□ -0.38
RNF40-205ENST00000563909 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
RNF40-205ENST00000563909 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 RFPL4AA6NLU0 287 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 RFPL4AL1F8VTS6 287 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 F8VVB4 439 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 F8VWA3 439 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 SIGLEC5O15389 551 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
RNF40-205ENST00000563909 TFAP2AP05549 437 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 PRKACAP17612 351 aa12.69□□□□□ -0.38
RNF40-205ENST00000563909 CHATP28329 748 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms