RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CCDC144NLQ6NUI1 221 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 SUMF2Q8NBJ7 301 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 NEK7Q8TDX7 302 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 GHSRQ92847 366 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 DPCDQ9BVM2 203 aaPredicted RBP14.14□□□□□ -0.15
NME3-205ENST00000563854 AMMECR1Q9Y4X0 333 aaPredicted RBP14.14□□□□□ -0.15
NME3-205ENST00000563854 A0A087X0M5 115 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 A0A1B0GX30 115 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 OGG1O15527 345 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 RBM11P57052 281 aaKnown RBP14.13□□□□□ -0.15
NME3-205ENST00000563854 EMX1Q04741 257 aaPredicted RBP14.13□□□□□ -0.15
NME3-205ENST00000563854 SLC22A6Q4U2R8 563 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 ATAD3CQ5T2N8 411 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 CENPVQ7Z7K6 275 aaPredicted RBP14.13□□□□□ -0.15
NME3-205ENST00000563854 OR4F17Q8NGA8 305 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 OR5AU1Q8NGC0 362 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 OR52N1Q8NH53 320 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 OR4F4Q96R69 305 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 ZNF184Q99676 751 aaPredicted RBP14.13□□□□□ -0.15
NME3-205ENST00000563854 OCSTAMPQ9BR26 566 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 CKLFQ9UBR5 152 aa14.13□□□□□ -0.15
NME3-205ENST00000563854 A0A1W2PPK0 400 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 MAGEA13PA6NCF6 341 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 J3QR06 171 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 GEMIN2O14893 280 aaKnown RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 OR2F2O95006 317 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 PRB2P02812 416 aaPredicted RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 CGB3P0DN86 165 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 CGB7P0DN87 165 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 KCNJ3P48549 501 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 ADARB1P78563 741 aaKnown RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 ST3GAL4Q11206 333 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 KHDC1LQ5JSQ8 128 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 DMKNQ6E0U4 476 aaPredicted RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 ASCL4Q6XD76 172 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 PACRGLQ8N7B6 248 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 OR56B4Q8NH76 319 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 UBALD1Q8TB05 177 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 WIPF2Q8TF74 440 aaPredicted RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 GGHQ92820 318 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 PAK1IP1Q9NWT1 392 aaPredicted RBP14.12□□□□□ -0.15
NME3-205ENST00000563854 PSG11Q9UQ72 335 aa14.12□□□□□ -0.15
NME3-205ENST00000563854 TRAV8-7A0A075B6U6 113 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 TRBV5-5A0A0J9YX44 114 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 A0A1W2PP11 408 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 A0A1W2PPE3 182 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 OOSP1A8MZH6 123 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 LY6LH3BQJ8 138 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
NME3-205ENST00000563854 HES1Q14469 280 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 BEAN1Q3B7T3 259 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 Q499Y3 187 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 YIF1BQ5BJH7 314 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 C8orf59Q8N0T1 100 aaPredicted RBP14.11□□□□□ -0.15
NME3-205ENST00000563854 JAGN1Q8N5M9 183 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 Q8NFD4 153 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 OR10X1Q8NGY0 326 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 CCDC107Q8WV48 283 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 MUL1Q969V5 352 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 OR14A2Q96R54 314 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 C8orf4Q9NR00 106 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 IL36GQ9NZH8 169 aa14.11□□□□□ -0.15
NME3-205ENST00000563854 TMEM30CPA0ZSE6 113 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 EFCAB10A6NFE3 127 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 ADARB2-AS1A8MUL3 147 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 MYL12BO14950 172 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 XPNPEP2O43895 674 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 GNAO1P09471 354 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 FAM106CPP0CH98 169 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 IGFBP3P17936 291 aaPredicted RBP14.1□□□□□ -0.15
NME3-205ENST00000563854 CAPGP40121 348 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 MADCAM1Q13477 382 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 DIAPH2-AS1Q14236 149 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 SAMD5Q5TGI4 173 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 AHSA2Q719I0 299 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 STX19Q8N4C7 294 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 DRAM1Q8N682 238 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 PGLYRP3Q96LB9 341 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 NCOR1P1Q9H4R4 102 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 PCDHB16Q9NRJ7 776 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 MRPS28Q9Y2Q9 187 aaKnown RBP14.1□□□□□ -0.15
NME3-205ENST00000563854 MOB4Q9Y3A3 225 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 HSPE1-MOB4S4R3N1 261 aa14.1□□□□□ -0.15
NME3-205ENST00000563854 TCRBV4S1A1TA0A5B7 111 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 NPIPB11E5RHQ5 1161 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 MAS1P04201 325 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 PF4V1P10720 104 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 GTF2F2P13984 249 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 TAS2R43P59537 309 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 RPS11P62280 158 aaKnown RBP eCLIP14.09□□□□□ -0.15
NME3-205ENST00000563854 HNF4GQ14541 408 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 MPV17LQ2QL34 196 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 OXLD1Q5BKU9 147 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 NHLRC3Q5JS37 347 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 LINC00596Q86U02 117 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 BPIFB6Q8NFQ5 453 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 IFT22Q9H7X7 185 aa14.09□□□□□ -0.15
NME3-205ENST00000563854 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.09□□□□□ -0.15
NME3-205ENST00000563854 IGHV3-43A0A0B4J1X8 118 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms