RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TPRX1Q8N7U7 411 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.05
SMG1-208ENST00000563448 OR5AP2Q8NGF4 316 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 OR56B4Q8NH76 319 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 PPP1R35Q8TAP8 253 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 ZNF286AQ9HBT8 521 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 MCUBQ9NWR8 336 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 CTSZQ9UBR2 303 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 KIF25Q9UIL4 384 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 TMEM30CPA0ZSE6 113 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 NKX6-3A6NJ46 265 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 H7C1Q1 480 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 MGST3O14880 152 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 TMPRSS2O15393 492 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 IGHV4-39P01824 125 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 HNRNPCP07910 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG1-208ENST00000563448 GSTT2P0CG29 244 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 RCC1P18754 421 aaPredicted RBP8.46□□□□□ -1.06
SMG1-208ENST00000563448 TBPP20226 339 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 GIFP27352 417 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 FAUP35544 74 aaKnown RBP8.46□□□□□ -1.06
SMG1-208ENST00000563448 GLIPR1P48060 266 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 IL13RA1P78552 427 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 PLA1AQ53H76 456 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
SMG1-208ENST00000563448 KRBOX4Q5JUW0 171 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 CCBE1Q6UXH8 406 aaPredicted RBP8.46□□□□□ -1.06
SMG1-208ENST00000563448 MINDY2Q8NBR6 621 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 TMEM185AQ8NFB2 350 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 ENKURQ8TC29 256 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 SLC6A7Q99884 636 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 FAM234AQ9H0X4 552 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 CHODLQ9H9P2 273 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 KAAG1Q9UBP8 84 aa8.46□□□□□ -1.06
SMG1-208ENST00000563448 USP9YO00507 2555 aaPredicted RBP8.45□□□□□ -1.06
SMG1-208ENST00000563448 FAM240BA0A1B0GVZ2 78 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 PPIHO43447 177 aaKnown RBP8.45□□□□□ -1.06
SMG1-208ENST00000563448 ADAM20O43506 726 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 AMY2AP04746 511 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 SCTP09683 121 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 TAS2R46P59540 309 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 KRTAP10-9P60411 292 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 EDDM3AQ14507 147 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 MEF2DQ14814 521 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 CHRFAM7AQ494W8 412 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 ACTBL2Q562R1 376 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 HIST2H2BCQ6DN03 193 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 ZNF782Q6ZMW2 699 aaPredicted RBP8.45□□□□□ -1.06
SMG1-208ENST00000563448 Q6ZNX1 250 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 PEG10Q86TG7 708 aaKnown RBP8.45□□□□□ -1.06
SMG1-208ENST00000563448 OR51S1Q8NGJ8 323 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 OR5D13Q8NGL4 314 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 MED30Q96HR3 178 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 MMP28Q9H239 520 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 DPAGT1Q9H3H5 408 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 MBNL3Q9NUK0 354 aaKnown RBP8.45□□□□□ -1.06
SMG1-208ENST00000563448 TRAPPC2LQ9UL33 140 aa8.45□□□□□ -1.06
SMG1-208ENST00000563448 MEIKINA0A087WXM9 373 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 TRDCB7Z8K6 153 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 DISC1C4P0D8 188 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 SDCBPO00560 298 aaPredicted RBP8.44□□□□□ -1.06
SMG1-208ENST00000563448 NDUFA2O43678 99 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 OR3A3P47888 321 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 ARPC4P59998 168 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 HLA-DRB3P79483 266 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 CDK10Q15131 360 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 KCNJ8Q15842 424 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 ZNF787Q6DD87 383 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 OVCH2Q7RTZ1 564 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 SLC36A1Q7Z2H8 476 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 RAB1CQ92928 201 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 DCTN5Q9BTE1 182 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 EHFQ9NZC4 300 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 ARHGAP32A7KAX9 2087 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 ARID1AO14497 2285 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 FABP7O15540 132 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 TCRBP04435 133 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 ERP29P30040 261 aaKnown RBP8.44□□□□□ -1.06
SMG1-208ENST00000563448 SSTR2P30874 369 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 P2RX3P56373 397 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 TMEM33P57088 247 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 HERPUD1Q15011 391 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 HMGN3Q15651 99 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 CARTPTQ16568 116 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 IGSF11Q5DX21 431 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 MUC20Q8N307 709 aaPredicted RBP8.44□□□□□ -1.06
SMG1-208ENST00000563448 ZNF525Q8N782 197 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 OR13A1Q8NGR1 328 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 MARVELD3Q96A59 401 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 TIMD4Q96H15 378 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 NECAP2Q9NVZ3 263 aa8.44□□□□□ -1.06
SMG1-208ENST00000563448 SLC25A10Q9UBX3 287 aaPredicted RBP8.44□□□□□ -1.06
SMG1-208ENST00000563448 HELZ2Q9BYK8 2649 aaKnown RBP8.43□□□□□ -1.06
SMG1-208ENST00000563448 IGKV1-6A0A0C4DH72 117 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 KIR2DS1A0A191URI9 304 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms