RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 RNF39Q9H2S5 420 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 WSB2Q9NYS7 404 aaPredicted RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 SRSF10O75494 262 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 TIMP1P01033 207 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 PPP1CCP36873 323 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 RPL18Q07020 188 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 ZNF707Q96C28 371 aaPredicted RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 RABAC1Q9UI14 185 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ZNF840PA6NDX5 716 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TSPOP30536 169 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SGCBQ16585 318 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ZNF324BQ6AW86 544 aaPredicted RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 TMEM45BQ96B21 275 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 MRM2Q9UI43 246 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 DUSP11O75319 330 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 KCNMB1Q16558 191 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 GFI1BQ5VTD9 330 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 C1orf140Q5VVS0 124 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 C20orf196Q8IYI0 205 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 OR51E1Q8TCB6 317 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TMEM56Q96MV1 263 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 PDFQ9HBH1 243 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TRAV1-1A0A0B4J248 108 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ZNF732B4DXR9 585 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 UTS2O95399 124 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 CD22P20273 847 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TM4SF1P30408 202 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 VIPR2P41587 438 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 UQCRFS1P47985 274 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 RAB9AP51151 201 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 NPEPL1Q8NDH3 523 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 MARS2Q96GW9 593 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 RUNX2Q13950 521 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ALKAL1Q6UXT8 129 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 PAQR9Q6ZVX9 377 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 OR2T6Q8NHC8 308 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 DNASE2BQ8WZ79 361 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SLC22A13Q9Y226 551 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SCN1AP35498 2009 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 J3QR06 171 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 ACTL6BO94805 426 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 FUT5Q11128 374 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 H1FNTQ75WM6 255 aaPredicted RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 RLN3Q8WXF3 142 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TECRQ9NZ01 308 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 FRRS1LQ9P0K9 344 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 B9D1Q9UPM9 204 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SLC17A4Q9Y2C5 497 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 A0A1B0GWB2 263 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 MED19A0JLT2 244 aaPredicted RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 C2orf72A6NCS6 295 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 CRYM-AS1A6NIL9 109 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 H3BVH4 76 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 NEURL1O76050 574 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 C1orf174Q8IYL3 243 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 OSR2Q8N2R0 312 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 OR9G4Q8NGQ1 327 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 CD99L2Q8TCZ2 262 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 WBP1LQ9NX94 342 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SLC31A1O15431 190 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 PAGE4O60829 102 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 APOMO95445 188 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 TMPRSS3P57727 454 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 EXOSC7Q15024 291 aaKnown RBP5.52□□□□□ -1.53
CLK3-212ENST00000563418 SSX8Q7RTT4 187 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 EDARADDQ8WWZ3 215 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 COPS9Q8WXC6 57 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 SLC2A4RGQ9NR83 387 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 Q9Y3F1 56 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 NHSL1Q5SYE7 1610 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 CD5LO43866 347 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 RAMP3O60896 148 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 IL4P05112 153 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 LINC00346Q8IVM7 164 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 RBM24Q9BX46 236 aaKnown RBP5.51□□□□□ -1.53
CLK3-212ENST00000563418 ADAMTS7Q9UKP4 1686 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 HYAL3O43820 417 aaPredicted RBP5.51□□□□□ -1.53
CLK3-212ENST00000563418 MPZL1O95297 269 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 GJB5O95377 273 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 ETHE1O95571 254 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 TFPI2P48307 235 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 FDX2Q6P4F2 183 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 NR2C2APQ86WQ0 139 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 PRR18Q8N4B5 295 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 OR2M7Q8NG81 312 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 BARX1Q9HBU1 254 aaPredicted RBP5.51□□□□□ -1.53
CLK3-212ENST00000563418 NRN1Q9NPD7 142 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 CACNG5Q9UF02 275 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 OR4C46A6NHA9 309 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 C1QL1O75973 258 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 OR4A8P0C604 315 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 SRIP30626 198 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 PSMB2P49721 201 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 RPS21P63220 83 aaKnown RBP5.51□□□□□ -1.53
CLK3-212ENST00000563418 HSD52Q0P140 79 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 LRRC10Q5BKY1 277 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 LY6G6FQ5SQ64 297 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 AMMECR1LQ6DCA0 310 aa5.51□□□□□ -1.53
CLK3-212ENST00000563418 GVQW1Q8N7I0 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms