RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 BATF3Q9NR55 127 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 PSMD13Q9UNM6 376 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SAMHD1Q9Y3Z3 626 aaKnown RBP1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 V9GYQ6 96 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 FHAD1B1AJZ9 1412 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 NRCAMQ92823 1304 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 PRDM2Q13029 1718 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 SIGLEC1Q9BZZ2 1709 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 LOC105371267A0A1B0GV96 52 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PGPA6NDG6 321 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ARGFXA6NJG6 315 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 C9JQL5 133 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 H0YJX3 145 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PGRMC1O00264 195 aaKnown RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 MFNGO00587 321 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ISLRO14498 428 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 GPR171O14626 319 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 COCHO43405 550 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OR7C2O60412 319 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PDCD6O75340 191 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OCMP0CE72 109 aaPredicted RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 MLNP12872 115 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PSMB9P28065 219 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PYCR1P32322 319 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 CDKN2CP42773 168 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 CDC34P49427 236 aaPredicted RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 REEP5Q00765 189 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 FUT5Q11128 374 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 SPCS2Q15005 226 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ALX1Q15699 326 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 EXOC3L4Q17RC7 722 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM249Q2WGJ8 235 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 LAIR2Q6ISS4 152 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TTC33Q6PID6 262 aaPredicted RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TBPL2Q6SJ96 375 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM183BPQ6ZVS7 135 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OLIG3Q7RTU3 272 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM19A3Q7Z5A8 133 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 SGPP2Q8IWX5 399 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF615Q8N8J6 731 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF680Q8NEM1 530 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OR8J2Q8NGG1 315 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OR5AK3PQ8NH89 298 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TMA16Q96EY4 203 aaKnown RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 IP6K3Q96PC2 410 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 GPR22Q99680 433 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TSSK6Q9BXA6 273 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF717Q9BY31 904 aaPredicted RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 POTEKPQ9BYX7 375 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PLA2G12AQ9BZM1 189 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 OR51E2Q9H255 320 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 DMAC2Q9NW81 257 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TAS2R7Q9NYW3 318 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 TAC3Q9UHF0 121 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 NAGKQ9UJ70 344 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 POMPQ9Y244 141 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PUS1Q9Y606 427 aaKnown RBP eCLIP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 THADAQ6YHU6 1953 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 CCDC171Q6TFL3 1326 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 PLA2R1Q13018 1463 aa1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 AHDC1Q5TGY3 1603 aaPredicted RBP1.88□□□□□ -2.11
SHCBP1-202ENST00000563219 SVILO95425 2214 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SLIT3O75094 1523 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 TRIP11Q15643 1979 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 IZUMO1RA6ND01 250 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 C9J4A7 227 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 C8orf87E5RJ46 101 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 KLRC4-KLRK1H3BQV0 150 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RPL36A-HNRNPH2H7BZ11 118 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 BET1O15155 118 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 CRXO43186 299 aaPredicted RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 NSA2O95478 260 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 TRGV3P03979 118 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RPS17P08708 135 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SNRPAP09012 282 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 OR5AC1P0C628 307 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 CECR9P0C854 216 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC2A1P11166 492 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RCVRNP35243 200 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 MAGEA2P43356 314 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SERPINB9P50453 376 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RAB2AP61019 212 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RBX1P62877 108 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 DEFA6Q01524 100 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 FMODQ06828 376 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 NDUFA5Q16718 116 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 TIMM23BQ5SRD1 257 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 LAMTOR1Q6IAA8 161 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 NIPAL1Q6NVV3 410 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 MORN3Q6PF18 240 aaPredicted RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 PLEKHG7Q6ZR37 379 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 BHLHA15Q7RTS1 189 aaPredicted RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 PAGE2Q7Z2X7 111 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM144Q7Z5S9 345 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 DPPA2Q7Z7J5 298 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC51BQ86UW2 128 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RIBC1Q8N443 379 aaPredicted RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF555Q8NEP9 628 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 LFNGQ8NES3 379 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms