RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 CRTAPO75718 401 aaPredicted RBP13.45□□□□□ -0.26
CDT1-202ENST00000562747 MGMTP16455 207 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 ZNF626Q68DY1 528 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 PLPPR1Q8TBJ4 325 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 TMEM133Q9H2Q1 129 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 ING3Q9NXR8 418 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 ZNF581Q9P0T4 197 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 RCC2Q9P258 522 aaKnown RBP13.45□□□□□ -0.26
CDT1-202ENST00000562747 KIF25Q9UIL4 384 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 TBL2Q9Y4P3 447 aaKnown RBP13.45□□□□□ -0.26
CDT1-202ENST00000562747 MEIKINA0A087WXM9 373 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 BTBD17A6NE02 478 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 H3BUI4 141 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 CCRL2O00421 344 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 SLC22A1O15245 554 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 IGHV4-59P01825 116 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 ARG1P05089 322 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 GALP22466 123 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 HTR2CP28335 458 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 RPL15P61313 204 aaKnown RBP13.44□□□□□ -0.26
CDT1-202ENST00000562747 KCTD21Q4G0X4 260 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 ATAD3CQ5T2N8 411 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 SLC35E4Q6ICL7 350 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 CD200R1LQ6Q8B3 271 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 TMEM104Q8NE00 496 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 OR6M1Q8NGM8 313 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 AJUBAQ96IF1 538 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 Q96M66 194 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 SELENOIQ9C0D9 397 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 BANF2Q9H503 90 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
CDT1-202ENST00000562747 IGHV2-26A0A0B4J1V2 119 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 KBTBD11-OT1A0A1B0GTJ5 212 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 MMP23AO75900 390 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 CGB3P0DN86 165 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 CGB7P0DN87 165 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 CDK2P24941 298 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
CDT1-202ENST00000562747 GLP1RP43220 463 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 RANBP1P43487 201 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
CDT1-202ENST00000562747 AANATQ16613 207 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 C17orf58Q2M2W7 97 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 PRAMEF5Q5TYX0 476 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 RTN4RL2Q86UN3 420 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 OR5R1Q8NH85 324 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 C17orf50Q8WW18 174 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 DYRK2Q92630 601 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 CLEC7AQ9BXN2 247 aa13.43□□□□□ -0.26
CDT1-202ENST00000562747 TRDV1A0A1B0GX56 115 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 TMEM30CPA0ZSE6 113 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 FAM181BA6NEQ2 426 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 MCRIP1C9JLW8 97 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 SLC17A2O00624 439 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 RRP9O43818 475 aaKnown RBP13.42□□□□□ -0.26
CDT1-202ENST00000562747 CRYBA1P05813 215 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 GLAP06280 429 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 VSIG8P0DPA2 414 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 PSMB9P28065 219 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 CD34P28906 385 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 PSMD7P51665 324 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
CDT1-202ENST00000562747 MINOS1Q5TGZ0 78 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 OR13A1Q8NGR1 328 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 KCNG3Q8TAE7 436 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 NEK7Q8TDX7 302 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 FAM46BQ96A09 425 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 GFI1Q99684 422 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 LINC00574Q9H8X3 128 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 PLGRKTQ9HBL7 147 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 VPREB3Q9UKI3 123 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 AK6Q9Y3D8 172 aaKnown RBP13.42□□□□□ -0.26
CDT1-202ENST00000562747 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 MINOS1-NBL1R4GNA1 71 aa13.42□□□□□ -0.26
CDT1-202ENST00000562747 A0A087X0M5 115 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 A0A1B0GX30 115 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 BPNT1O95861 308 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 MPIG6BO95866 241 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 IL1AP01583 271 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 FUT3P21217 361 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 RPS27AP62979 156 aaKnown RBP13.41□□□□□ -0.26
CDT1-202ENST00000562747 LRRC75BQ2VPJ9 315 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 KIAA2026Q5HYC2 2103 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 RAB12Q6IQ22 244 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 BRICD5Q6PL45 260 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 ZNF497Q6ZNH5 498 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 GDPGP1Q6ZNW5 385 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 LHFPL4Q7Z7J7 247 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 ABHD12Q8N2K0 398 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 ZNF596Q8TC21 504 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 MRGPRDQ8TDS7 321 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 SSX3Q99909 188 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms