RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 STRADBQ9C0K7 418 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 ZMAT3Q9HA38 289 aaKnown RBP6.29□□□□□ -1.4
CDH1-203ENST00000561751 C1RLQ9NZP8 487 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 TTC3P53804 2025 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 PLXNA2O75051 1894 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 FAM221AA4D161 298 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 HIDE1A8MVS5 230 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 DIRC3C9JPN6 131 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 P2RY10O00398 339 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 MLNRO43193 412 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDH1-203ENST00000561751 CD5LO43866 347 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 IGHMP01871 453 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 MT-ND6P03923 174 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 GPX1P07203 203 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 CA3P07451 260 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 GDF1P27539 372 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 BCL6P41182 706 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 VIPR2P41587 438 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 SLC11A1P49279 550 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 PSMB3P49720 205 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 SNU13P55769 128 aaKnown RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 CTXN1P60606 82 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 RHOBP62745 196 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 CSNK2A1P68400 391 aaPredicted RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 MEF2BQ02080 365 aaPredicted RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 ID3Q02535 119 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 DUSP2Q05923 314 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 FMODQ06828 376 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 DPTQ07507 201 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 RNPS1Q15287 305 aaKnown RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 CNN3Q15417 329 aaKnown RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 VAMP3Q15836 100 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 MSMPQ1L6U9 139 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 WDR73Q6P4I2 378 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 C22orf39Q6P5X5 142 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 RFLNAQ6ZTI6 216 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 Q6ZVL8 140 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 HSD11B1LQ7Z5J1 315 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 HMGN2P46Q86SG4 172 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 SLC39A11Q8N1S5 342 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 DEFB125Q8N687 156 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 SIGLECL1Q8N7X8 197 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 Q8N976 141 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 Q8NFD4 153 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR52R1Q8NGF1 315 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR52L2PQ8NGH6 319 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR5A2Q8NGI9 324 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR2AJ1Q8NGZ0 328 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 NT5CQ8TCD5 201 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR5P3Q8WZ94 311 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 BCL2L2Q92843 193 aaPredicted RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 HSPB9Q9BQS6 159 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 ABHD14AQ9BUJ0 271 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 G6PC2Q9NQR9 355 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 GNG13Q9P2W3 67 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 CGGBP1Q9UFW8 167 aaPredicted RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 TAC3Q9UHF0 121 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 B9D1Q9UPM9 204 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 RCL1Q9Y2P8 373 aaKnown RBP6.28□□□□□ -1.4
CDH1-203ENST00000561751 OR51B2Q9Y5P1 312 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 PIKFYVEQ9Y2I7 2098 aa6.28□□□□□ -1.4
CDH1-203ENST00000561751 MYO7AQ13402 2215 aa6.27□□□□□ -1.4
CDH1-203ENST00000561751 MDC1Q14676 2089 aaKnown RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 NINQ8N4C6 2090 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZDBF2Q9HCK1 2354 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 A0A1B0GTH9 108 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 LOC102725191A0A1B0GVB3 256 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 A0A1W2PPV9 198 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 NKX2-6A6NCS4 301 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF891A8MT65 544 aaPredicted RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 PRR33A8MZF0 331 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 DEGS1O15121 323 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ERI3O43414 337 aaKnown RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 OR7C2O60412 319 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 CKMP06732 381 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 WNT2P09544 360 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 STAG3L3P0CL85 134 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 CRISP2P16562 243 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF10P21506 573 aaPredicted RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 IL3RAP26951 378 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 CMPK1P30085 196 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 NTSR1P30989 418 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ADMP35318 185 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF93P35789 620 aaPredicted RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 LGALS7P47929 136 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ZNF133P52736 654 aaPredicted RBP6.27□□□□□ -1.41
CDH1-203ENST00000561751 TMEM50BP56557 158 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ERVS71-1P61550 626 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 PPP1CBP62140 327 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ARFRP1Q13795 201 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ADIRFQ15847 76 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 ACKR1Q16570 336 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 TDRG1Q3Y452 100 aa6.27□□□□□ -1.41
CDH1-203ENST00000561751 SLC22A6Q4U2R8 563 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms