RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 EMX1Q04741 257 aaPredicted RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 ST3GAL4Q11206 333 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 DDI2Q5TDH0 399 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 C16orf82Q7Z2V1 217 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 NDUFA11Q86Y39 141 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 OSR2Q8N2R0 312 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 PACRGLQ8N7B6 248 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 ZFP41Q8N8Y5 198 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 SUMF2Q8NBJ7 301 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 SETD9Q8NE22 299 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 OR52N1Q8NH53 320 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 OR9G1Q8NH87 305 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 RFESDQ8TAC1 157 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 PLPPR1Q8TBJ4 325 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 MRGPRDQ8TDS7 321 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 SLC25A33Q9BSK2 321 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 DPCDQ9BVM2 203 aaPredicted RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 MMP28Q9H239 520 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 IFT22Q9H7X7 185 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 LIN7BQ9HAP6 207 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 C8orf4Q9NR00 106 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 CHCHD3Q9NX63 227 aaKnown RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 IDI2-AS1Q9NZ38 188 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 IL36GQ9NZH8 169 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 MAGEA13PA6NCF6 341 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 OOSP1A8MZH6 123 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 NPIPB11E5RHQ5 1161 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 J3QL48 77 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 J3QR06 171 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 GEMIN2O14893 280 aaKnown RBP8.21□□□□□ -1.1
CLK3-205ENST00000561673 GPX5O75715 221 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 OR7C1O76099 320 aaPredicted RBP8.21□□□□□ -1.1
CLK3-205ENST00000561673 OR2F2O95006 317 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 IL1AP01583 271 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 CSTBP04080 98 aaKnown RBP8.21□□□□□ -1.1
CLK3-205ENST00000561673 AMY1AP04745 511 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 AMY2AP04746 511 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 LPLP06858 475 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 SERPINA2P20848 420 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 KCNJ3P48549 501 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 RBM11P57052 281 aaKnown RBP8.21□□□□□ -1.1
CLK3-205ENST00000561673 RIPK1Q13546 671 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 RCN1Q15293 331 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 LTC4SQ16873 150 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 Q499Y3 187 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 ABCA11PQ4W5N1 156 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 YIF1BQ5BJH7 314 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 NHLRC3Q5JS37 347 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 LAIR2Q6ISS4 152 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 CCDC144NLQ6NUI1 221 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 OR5AU1Q8NGC0 362 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 CAPSLQ8WWF8 208 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 AKR1E2Q96JD6 320 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 PGLYRP3Q96LB9 341 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 S100A13Q99584 98 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 ZNF184Q99676 751 aaPredicted RBP8.21□□□□□ -1.1
CLK3-205ENST00000561673 PSG11Q9UQ72 335 aa8.21□□□□□ -1.1
CLK3-205ENST00000561673 KIAA2026Q5HYC2 2103 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 TRAV8-7A0A075B6U6 113 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 TRBV5-7A0A0A0MS05 114 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 PNMA8CA0A1B0GUJ8 204 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 A0A1W2PP11 408 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 A0A1W2PPK0 400 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A18PA6NE21 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A16PA6NEW6 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 EFCAB10A6NFE3 127 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A20PA6NIJ5 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 SH2D7A6NKC9 451 aaPredicted RBP8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A9PA6NNJ1 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A12PA8MX19 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A5PA8MXJ8 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 XPNPEP2O43895 674 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A15PP0C7V4 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A13PP0C7W8 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A14PP0C7W9 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM90A24PP0C7X0 464 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 SSTR5P35346 364 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 CAPGP40121 348 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 MNDAP41218 407 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 CD83Q01151 205 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 MED21Q13503 144 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 DIAPH2-AS1Q14236 149 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 BEAN1Q3B7T3 259 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 SLC22A6Q4U2R8 563 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 TCTEX1D4Q5JR98 221 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 SAMD5Q5TGI4 173 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 CENPVQ7Z7K6 275 aaPredicted RBP8.2□□□□□ -1.1
CLK3-205ENST00000561673 LINC00596Q86U02 117 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 RPEQ96AT9 228 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 OR14A2Q96R54 314 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 PAK1IP1Q9NWT1 392 aaPredicted RBP8.2□□□□□ -1.1
CLK3-205ENST00000561673 CKLFQ9UBR5 152 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 PSORS1C1Q9UIG5 152 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 HSPE1-MOB4S4R3N1 261 aa8.2□□□□□ -1.1
CLK3-205ENST00000561673 A0A1W2PPE3 182 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms