RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 BCL3P20749 454 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 HINT1P49773 126 aaPredicted RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 UBE2L3P68036 154 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PSG5Q15238 335 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MOB3BQ86TA1 216 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MRPL30Q8TCC3 161 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MRPS18AQ9NVS2 196 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PLA2G3Q9NZ20 509 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PPYP01298 95 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 SP1P08047 785 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 COL5A1-AS1Q5SY13 56 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 ASCC3Q8N3C0 2202 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PMS2P1A4D2B8 440 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PLAURQ03405 335 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MRGPRGQ86SM5 289 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 ATG4DQ86TL0 474 aaPredicted RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 CACFD1Q9UGQ2 172 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 TRAV17A0A0B4J275 112 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 IGHV5-51A0A0C4DH38 117 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 A0A1W2PPC4 97 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 LRRC3CA6NJW4 275 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 SRSF10O75494 262 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 PNLIPP16233 465 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 NPY1RP25929 384 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 CD81P60033 236 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 OR4A47Q6IF82 309 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 TRIP11Q15643 1979 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 RECKO95980 971 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 S100A4P26447 101 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM50BP56557 158 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 SLC35E3Q7Z769 313 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 FGF14Q92915 247 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 ADAT3Q96EY9 351 aaPredicted RBP8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 SLC7A10Q9NS82 523 aa8.98□□□□□ -0.97
GTF3C1-202ENST00000561623 OR5B21A6NL26 309 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 FGF2P09038 288 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 FBLIM1Q8WUP2 373 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 PRSS1P07477 247 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 MEOX1P50221 254 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 CCR5P51681 352 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 PSG6Q00889 435 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 LAIR2Q6ISS4 152 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 OR1L3Q8NH93 324 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 TRAV39A0A0B4J263 110 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 APCSP02743 223 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 RTP5Q14D33 572 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 IGFBP7Q16270 282 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 NHLRC3Q5JS37 347 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 D2HGDHQ8N465 521 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 HSPB9Q9BQS6 159 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 SCN7AQ01118 1682 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 SPTY2D1-AS1A0A0U1RR47 76 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 NCBP2LA6PVI3 153 aaKnown RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 FAM157CP0CG43 387 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 PGA4P0DJD7 388 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 PGA5P0DJD9 388 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 KIR3DL2P43630 455 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 H2BFSP57053 126 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 SLC35B1P78383 322 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 OR2D3Q8NGH3 330 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 OR1B1Q8NGR6 318 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 WFIKKN1Q96NZ8 548 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 CLEC5AQ9NY25 188 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 CELA2BP08218 269 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 RNF224P0DH78 156 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 VDAC1P21796 283 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 GALNSP34059 522 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 MDH2P40926 338 aaKnown RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 MMP16P51512 607 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 WDR25Q64LD2 544 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 Q8IYB0 196 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 LRRC75AQ8NAA5 344 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 OR4F17Q8NGA8 305 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 RARRES2Q99969 163 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM208Q9BTX3 173 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF107Q9UII5 783 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 OR1C1Q15619 314 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 WFDC6Q9BQY6 131 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM140Q9NV12 185 aa8.97□□□□□ -0.97
GTF3C1-202ENST00000561623 WISP3O95389 354 aaPredicted RBP8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 HOXD4P09016 255 aaPredicted RBP8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 PCP4P48539 62 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 TGIF1Q15583 401 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 GABRA6Q16445 453 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 OR8A1Q8NGG7 326 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM56Q96MV1 263 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 PSG2P11465 335 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF137PP52743 207 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 GPR61Q9BZJ8 451 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 SLC26A1Q9H2B4 701 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 FAM60AQ9NP50 221 aa8.96□□□□□ -0.97
GTF3C1-202ENST00000561623 H0YL77 283 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms