RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GDNFP39905 211 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 GNG10P50151 68 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 FOXL1Q12952 345 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 RAB11BQ15907 218 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 SSX1Q16384 188 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 MPV17LQ2QL34 196 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 AWAT1Q58HT5 328 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
HERC1-212ENST00000561348 C22orf42Q6IC83 251 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 OR52W1Q6IF63 320 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 CDH26Q8IXH8 852 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 ABHD12Q8N2K0 398 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 OR4K15Q8NH41 348 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 SETD6Q8TBK2 473 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 PHYHIPQ92561 330 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 NEDD4LQ96PU5 975 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 UQCC2Q9BRT2 126 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 UNKLQ9H9P5 680 aaKnown RBP8.23□□□□□ -1.09
HERC1-212ENST00000561348 SEBOXQ9HB31 216 aaPredicted RBP8.23□□□□□ -1.09
HERC1-212ENST00000561348 CALYQ9NYX4 217 aa8.23□□□□□ -1.09
HERC1-212ENST00000561348 IGHV3-43A0A0B4J1X8 118 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 A0A1W2PPE3 182 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 TMEM89A2RUT3 159 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 ZNF729A6NN14 1252 aaPredicted RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 AIPO00170 330 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 CCRL2O00421 344 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 CSN2P05814 226 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 IGHV3-43DP0DP04 118 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 HKR1P10072 659 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 ARSBP15848 533 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 JUNBP17275 347 aaPredicted RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 MDKP21741 143 aaPredicted RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 SSTR5P35346 364 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 RAG2P55895 527 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 LRRC75BQ2VPJ9 315 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 RSBN1Q5VWQ0 802 aaPredicted RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 LINC00596Q86U02 117 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 BEND2Q8NDZ0 799 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 ARL11Q969Q4 196 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 TMEM59Q9BXS4 323 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 YTHDF1Q9BYJ9 559 aaKnown RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 ZNF286AQ9HBT8 521 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 SPACA1Q9HBV2 294 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 CHMP1AQ9HD42 196 aaPredicted RBP8.22□□□□□ -1.09
HERC1-212ENST00000561348 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 VPREB3Q9UKI3 123 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 POMT1Q9Y6A1 747 aa8.22□□□□□ -1.09
HERC1-212ENST00000561348 LOC100506127A0A0U1RQW1 187 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 CLDN34H7C241 214 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 F2RL2O00254 374 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 PDCD5O14737 125 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 RBP4P02753 201 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 UBBP0CG47 229 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 VSIG8P0DPA2 414 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 FUT3P21217 361 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 CD24P25063 80 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 HTR1DP28221 377 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 BLVRBP30043 206 aaPredicted RBP8.21□□□□□ -1.1
HERC1-212ENST00000561348 KCNJ3P48549 501 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 PRRX1P54821 245 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 OR10A3P58181 314 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.1
HERC1-212ENST00000561348 SYT6Q5T7P8 510 aaPredicted RBP8.21□□□□□ -1.1
HERC1-212ENST00000561348 SLC35E4Q6ICL7 350 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 ZNF773Q6PK81 442 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 HEPN1Q6WQI6 88 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 TMEM219Q86XT9 240 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 LDLRAD3Q86YD5 345 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 DYNAPQ8N1N2 210 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 Q8NFD4 153 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 OR6M1Q8NGM8 313 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 OR5R1Q8NH85 324 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 KCNG3Q8TAE7 436 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 CORO2AQ92828 525 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 MRPS24Q96EL2 167 aaKnown RBP8.21□□□□□ -1.1
HERC1-212ENST00000561348 CYYR1Q96J86 154 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 CHCHD6Q9BRQ6 235 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 NICN1Q9BSH3 213 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 NDUFB11Q9NX14 153 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 IDI2-AS1Q9NZ38 188 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 GHRLQ9UBU3 117 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 SSR3Q9UNL2 185 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 V9GY05 133 aa8.21□□□□□ -1.1
HERC1-212ENST00000561348 STAB1Q9NY15 2570 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 A0A075B6Q4 140 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 SDCBPO00560 298 aaPredicted RBP8.2□□□□□ -1.1
HERC1-212ENST00000561348 MRPS14O60783 128 aaKnown RBP8.2□□□□□ -1.1
HERC1-212ENST00000561348 SC5DO75845 299 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 BPNT1O95861 308 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 CFPP27918 469 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 MXD1Q05195 221 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 NHLRC3Q5JS37 347 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 C1orf100Q5SVJ3 147 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 UTF1Q5T230 341 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 UBE2UQ5VVX9 321 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 ZNF626Q68DY1 528 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 GDPGP1Q6ZNW5 385 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms