RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	DDIT4	Q9NX09	232 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	CALML5	Q9NZT1	146 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	DEC1	Q9P2X7	70 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	OR51B4	Q9Y5P0	310 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	SPTAN1	Q13813	2472 aa	Known RBP	3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	TEX15	Q9BXT5	2789 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	SIPA1L1	O43166	1804 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	ATAD5	Q96QE3	1844 aa		3.56	□□□□□ -1.84
TCF12-223	ENST00000561235	C2CD3	Q4AC94	2353 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	IGKV1D-13	A0A0B4J2D9	117 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235		A0A1B0GV90	55 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235		A0A1W2PRF3	423 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235		A0A1W2PRM7	423 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235		H3BNH8	94 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MKRN2OS	H3BPM6	223 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235		M0QYV0	167 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	DFFA	O00273	331 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	UGT2B11	O75310	529 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	UPK1B	O75841	260 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	OR2B3	O76000	313 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	TSPAN13	O95857	204 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	RPN2	P04844	631 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	PCCA	P05165	728 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	GKN3P	P0CG01	181 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	IGKV1-13	P0DP09	117 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MGMT	P16455	207 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ME2	P23368	584 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	HLA-DMA	P28067	261 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	PMEL	P40967	661 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	GPR1	P46091	355 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	GPR6	P46095	362 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	LHX2	P50458	406 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ERF	P50548	548 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	RAB5C	P51148	216 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	FGF8	P55075	233 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	FBXW4	P57775	412 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MRPS10	P82664	201 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	SEMG2	Q02383	582 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	BTN1A1	Q13410	526 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MADCAM1	Q13477	382 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	QPRT	Q15274	297 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	SF3A2	Q15428	464 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ZNF658B	Q4V348	819 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	LPCAT4	Q643R3	524 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	DEFB128	Q7Z7B8	93 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	TMED4	Q7Z7H5	227 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	SELENOH	Q8IZQ5	122 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	SYS1	Q8N2H4	156 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ARIH2OS	Q8N7S6	290 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	OR4D6	Q8NGJ1	314 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	OR5M1	Q8NGP8	315 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	OR1N2	Q8NGR9	330 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	NUBPL	Q8TB37	319 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	CA5BP1	Q8WTZ4	195 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	PHF10	Q8WUB8	498 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	DCAKD	Q8WVC6	231 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	TMEM239	Q8WW34	195 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	CREB3L1	Q96BA8	519 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	NARS2	Q96I59	477 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	C14orf144	Q96I85	54 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	HBEGF	Q99075	208 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	NIPSNAP1	Q9BPW8	284 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	CCDC32	Q9BV29	185 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	GGACT	Q9BVM4	153 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MAP1LC3C	Q9BXW4	147 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	BEX2	Q9BXY8	128 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ING2	Q9H160	280 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	FAM96A	Q9H5X1	160 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	RPF2	Q9H7B2	306 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	CACYBP	Q9HB71	228 aa	Known RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	NLE1	Q9NVX2	485 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	MS4A12	Q9NXJ0	267 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	OR12D3	Q9UGF7	316 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	C3orf18	Q9UK00	162 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	PSG11	Q9UQ72	335 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	SLC17A4	Q9Y2C5	497 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ITPR3	Q14573	2671 aa		3.55	□□□□□ -1.84
TCF12-223	ENST00000561235	ASXL3	Q9C0F0	2248 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235		A0A1B0GTI1	187 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	FAM166B	A8MTA8	275 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	PPP1R2P9	O14990	202 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	POP7	O75817	140 aa	Known RBP	3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	IFNA21	P01568	189 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	CSF3	P09919	207 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	NBEAP1	P0C6P0	100 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	PSG2	P11465	335 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	CNR1	P21554	472 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	DDT	P30046	118 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	GNRHR	P30968	328 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	S100A11	P31949	105 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	MAGEA12	P43365	314 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	IDH2	P48735	452 aa	Known RBP	3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	SUB1	P53999	127 aa	Known RBP eCLIP	3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	ATP5J2	P56134	94 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	RBX1	P62877	108 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	GTF2B	Q00403	316 aa		3.54	□□□□□ -1.84
TCF12-223	ENST00000561235	PTGES3	Q15185	160 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms