RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 IRF2P14316 349 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 HLA-GP17693 338 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 GNLYP22749 145 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 CD34P28906 385 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 RAP2BP61225 183 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 COL10A1Q03692 680 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 SPRNQ5BIV9 151 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 IGSF11Q5DX21 431 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 LPCAT3Q6P1A2 487 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 C11orf88Q6PI97 169 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 SLC38A6Q8IZM9 456 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 TMEM230Q96A57 120 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 PIK3IP1Q96FE7 263 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 TMEM204Q9BSN7 226 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 FXYD6Q9H0Q3 95 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 LIME1Q9H400 295 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 DLL4Q9NR61 685 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 SLC23A1Q9UHI7 598 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 PPP1R3CQ9UQK1 317 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 PCNX1Q96RV3 2341 aa14.38□□□□□ -0.11
HDDC3-206ENST00000561036 LRRC30A6NM36 301 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 DEFB108AA8MXU0 73 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 TUSC2O75896 110 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 SFT2D2O95562 160 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 AADACP22760 399 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 LOXP28300 417 aaPredicted RBP14.37□□□□□ -0.11
HDDC3-206ENST00000561036 OR3A1P47881 315 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 CEBPDP49716 269 aaPredicted RBP14.37□□□□□ -0.11
HDDC3-206ENST00000561036 NLRC3Q7RTR2 1065 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 CD177Q8N6Q3 437 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 ZNF486Q96H40 463 aaPredicted RBP14.37□□□□□ -0.11
HDDC3-206ENST00000561036 SNX22Q96L94 193 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 HYLS1Q96M11 299 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 FBXO9Q9UK97 447 aaPredicted RBP14.37□□□□□ -0.11
HDDC3-206ENST00000561036 TRAPPC2LQ9UL33 140 aa14.37□□□□□ -0.11
HDDC3-206ENST00000561036 DSPP15924 2871 aaKnown RBP14.37□□□□□ -0.11
HDDC3-206ENST00000561036 ATRXP46100 2492 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 IGKV1D-17A0A075B6S4 117 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 TRBV6-7A0A0A0MS04 114 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 FAM172BPA6NC97 362 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 ZNF737O75373 536 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 SLC22A5O76082 557 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 PPYP01298 95 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 MUC1P15941 1255 aaPredicted RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 RCC1P18754 421 aaPredicted RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 VAMP1P23763 118 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 ATXN7L3Q14CW9 347 aaPredicted RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 HERPUD1Q15011 391 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 HMGN3Q15651 99 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 ZNF672Q499Z4 452 aaPredicted RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 TRAT1Q6PIZ9 186 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 ITLN2Q8WWU7 325 aaPredicted RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 NCOR1P1Q9H4R4 102 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 CISD1Q9NZ45 108 aaKnown RBP14.36□□□□□ -0.11
HDDC3-206ENST00000561036 KCNIP1Q9NZI2 227 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 PIPOXQ9P0Z9 390 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 PKD1L2Q7Z442 2459 aa14.36□□□□□ -0.11
HDDC3-206ENST00000561036 IGKV1-6A0A0C4DH72 117 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 BET1O15155 118 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 SIAH2O43255 324 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 RPS2P15880 293 aaKnown RBP14.35□□□□□ -0.11
HDDC3-206ENST00000561036 SRSF4Q08170 494 aaKnown RBP14.35□□□□□ -0.11
HDDC3-206ENST00000561036 BAMBIQ13145 260 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 SNTB1Q13884 538 aaKnown RBP14.35□□□□□ -0.11
HDDC3-206ENST00000561036 MST1LQ2TV78 715 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 C6orf183Q5T699 404 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 TEX36Q5VZQ5 186 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 LIN54Q6MZP7 749 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 FAM185AQ8N0U4 392 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 BOLLQ8N9W6 283 aaKnown RBP14.35□□□□□ -0.11
HDDC3-206ENST00000561036 UXS1Q8NBZ7 420 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 OR10J5Q8NHC4 309 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 COQ8AQ8NI60 647 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 ANGPTL6Q8NI99 470 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 TMPRSS13Q9BYE2 586 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 SHARPINQ9H0F6 387 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 OPN4Q9UHM6 478 aa14.35□□□□□ -0.11
HDDC3-206ENST00000561036 OOEPA6NGQ2 149 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 CRYM-AS1A6NIL9 109 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 DBX1A6NMT0 343 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 GOSR2O14653 212 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 MGST3O14880 152 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 SNAPC5O75971 98 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 RGS11O94810 467 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 IFNA2P01563 188 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 PI3P19957 117 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 NFYAP23511 347 aaPredicted RBP14.34□□□□□ -0.11
HDDC3-206ENST00000561036 UQCRFS1P47985 274 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 FXYD4P59646 89 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 SUPT4H1P63272 117 aaKnown RBP14.34□□□□□ -0.11
HDDC3-206ENST00000561036 CCL8P80075 99 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 SWI5Q1ZZU3 235 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 ABCA11PQ4W5N1 156 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 STUMQ69YW2 141 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 CLEC18BQ6UXF7 455 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 H1FOOQ8IZA3 346 aaPredicted RBP14.34□□□□□ -0.11
HDDC3-206ENST00000561036 C1orf87Q8N0U7 546 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms