RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 A0A1W2PP11 408 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 IGLV1-47P01700 117 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 SERPINA2P20848 420 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 GDNFP39905 211 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 INSL4Q14641 139 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 RBM48Q5RL73 367 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 PRAMEF5Q5TYX0 476 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 LIAT1Q6ZQX7 453 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 ABHD12Q8N2K0 398 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 JAGN1Q8N5M9 183 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 ZNF565Q8N9K5 539 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 PLPPR1Q8TBJ4 325 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 DPCDQ9BVM2 203 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 TCF7L1Q9HCS4 588 aa12.25□□□□□ -0.45
SNRPA1-210ENST00000560383 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 NPIPB11E5RHQ5 1161 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 HSPB6O14558 160 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 RRP9O43818 475 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 UCHL1P09936 223 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 DYNC1I2Q13409 638 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 SSX2Q16385 188 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 AWAT2Q6E213 333 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 SLC35E4Q6ICL7 350 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 BAIAP2L2Q6UXY1 529 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 LRRTM1Q86UE6 522 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 OR13A1Q8NGR1 328 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 UFD1Q92890 307 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 CNBD2Q96M20 576 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 TMED9Q9BVK6 235 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 KRTAP3-2Q9BYR7 98 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 RAB18Q9NP72 206 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 GHRLQ9UBU3 117 aa12.24□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A10PA6NDY2 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A18PA6NE21 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A16PA6NEW6 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A20PA6NIJ5 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A7PA6NKC0 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A22PA8MWA6 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A12PA8MX19 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A5PA8MXJ8 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A23PA8MXZ1 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 IL1AP01583 271 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A15PP0C7V4 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A13PP0C7W8 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A14PP0C7W9 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM90A24PP0C7X0 464 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 HTR1DP28221 377 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 VHLP40337 213 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 MLLT11Q13015 90 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM27D1Q5T7N8 215 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 C11orf88Q6PI97 169 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 ZNF596Q8TC21 504 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 KIRREL1Q96J84 757 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 ZNF286AQ9HBT8 521 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 CALYQ9NYX4 217 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 FBLN5Q9UBX5 448 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 BLOC1S6Q9UL45 172 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 TCF19Q9Y242 345 aa12.23□□□□□ -0.45
SNRPA1-210ENST00000560383 TET2Q6N021 2002 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 A6NDX4 124 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 CPEP16870 476 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 SRMP19623 302 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 PSMA1P25786 263 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 GLP1RP43220 463 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 TRAM1Q15629 374 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 TBCEQ15813 527 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 FAM189A2Q15884 450 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 LY6EQ16553 131 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 C2orf68Q2NKX9 166 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 HSD17B12Q53GQ0 312 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 C1orf100Q5SVJ3 147 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 CEACAM19Q7Z692 300 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 GAPTQ8N292 157 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 TMEM104Q8NE00 496 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 OR10A7Q8NGE5 316 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 DPM3Q9P2X0 92 aa12.22□□□□□ -0.45
SNRPA1-210ENST00000560383 TMEM30CPA0ZSE6 113 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 LY6LH3BQJ8 138 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 CHST1O43916 411 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 GLAP06280 429 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 UBBP0CG47 229 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 MGMTP16455 207 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 GZMHP20718 246 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 KIR2DS4P43632 304 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 RAB13P51153 203 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 HLA-DRB5Q30154 266 aa12.21□□□□□ -0.45
SNRPA1-210ENST00000560383 UTF1Q5T230 341 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms