RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 KIR2DS4P43632 304 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 KRTAP10-3P60369 221 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 INSL4Q14641 139 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 ATXN7L3Q14CW9 347 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-213ENST00000560175 MED22Q15528 200 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 PRR31Q5SQ13 230 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 C1orf100Q5SVJ3 147 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 BAIAP2L2Q6UXY1 529 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 TMEM91Q6ZNR0 172 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 TRAPPC6BQ86SZ2 158 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 LRRTM1Q86UE6 522 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 ABHD12Q8N2K0 398 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 OR10A7Q8NGE5 316 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 MUL1Q969V5 352 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 S100A13Q99584 98 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 DPCDQ9BVM2 203 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-213ENST00000560175 GHRLQ9UBU3 117 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 KIF25Q9UIL4 384 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 MRPS28Q9Y2Q9 187 aaKnown RBP10.66□□□□□ -0.7
SMAD3-213ENST00000560175 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 A6NDX4 124 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 MAS1P04201 325 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 GLAP06280 429 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 CPEP16870 476 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 SRMP19623 302 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 GZMHP20718 246 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 SERPINA2P20848 420 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 HTR1DP28221 377 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 MLLT11Q13015 90 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-213ENST00000560175 SSX2Q16385 188 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 SLC22A6Q4U2R8 563 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 FAM27D1Q5T7N8 215 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 PRAMEF5Q5TYX0 476 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 DHRS7BQ6IAN0 325 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-213ENST00000560175 GLIPR1L1Q6UWM5 242 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 CCBE1Q6UXH8 406 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-213ENST00000560175 SLC16A12Q6ZSM3 486 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 JAGN1Q8N5M9 183 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 KIRREL1Q96J84 757 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 RANBP3Q9H6Z4 567 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-213ENST00000560175 RAB18Q9NP72 206 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 DPM3Q9P2X0 92 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 TCF19Q9Y242 345 aa10.65□□□□□ -0.7
SMAD3-213ENST00000560175 MEIKINA0A087WXM9 373 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 DENRO43583 198 aaKnown RBP10.64□□□□□ -0.71
SMAD3-213ENST00000560175 CHST1O43916 411 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 OR7C1O76099 320 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-213ENST00000560175 VHLP40337 213 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 RAB13P51153 203 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 TRAM1Q15629 374 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 TBCEQ15813 527 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-213ENST00000560175 UTF1Q5T230 341 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 LIPKQ5VXJ0 399 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF497Q6ZNH5 498 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 Q8N2B8 174 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 TMEM104Q8NE00 496 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF596Q8TC21 504 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 CREB3L1Q96BA8 519 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 Q96M66 194 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 MGLLQ99685 303 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF286AQ9HBT8 521 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 SPACA1Q9HBV2 294 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 CALYQ9NYX4 217 aa10.64□□□□□ -0.71
SMAD3-213ENST00000560175 C15orf65H3BRN8 121 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 BUB1B-PAK6H3BSN5 160 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 HSPB6O14558 160 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 ORC5O43913 435 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 MRPS14O60783 128 aaKnown RBP10.63□□□□□ -0.71
SMAD3-213ENST00000560175 IL1AP01583 271 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 MT-ND4P03905 459 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 UBBP0CG47 229 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 PSMA1P25786 263 aaKnown RBP10.63□□□□□ -0.71
SMAD3-213ENST00000560175 QRFPP83859 136 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
SMAD3-213ENST00000560175 LY6EQ16553 131 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 AWAT2Q6E213 333 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 CEACAM19Q7Z692 300 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 DTX3Q8N9I9 347 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 OR52M1Q8NGK5 317 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 UFD1Q92890 307 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 CNBD2Q96M20 576 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 TCF7L1Q9HCS4 588 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 IDI2-AS1Q9NZ38 188 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 VWFP04275 2813 aa10.63□□□□□ -0.71
SMAD3-213ENST00000560175 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 LEUTXA8MZ59 168 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 OOSP1A8MZH6 123 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 H3BUI4 141 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 SLC22A1O15245 554 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 CA11O75493 328 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 MGMTP16455 207 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 EFNB2P52799 333 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 PRRX1P54821 245 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 SRSF4Q08170 494 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms