RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 KLK11Q9UBX7 282 aa7.75□□□□□ -1.17
HERC1-206ENST00000559996 GLS2Q9UI32 602 aa7.75□□□□□ -1.17
HERC1-206ENST00000559996 MRPS7Q9Y2R9 242 aaKnown RBP7.75□□□□□ -1.17
HERC1-206ENST00000559996 POLR3KQ9Y2Y1 108 aaPredicted RBP7.75□□□□□ -1.17
HERC1-206ENST00000559996 RBMX2Q9Y388 322 aaKnown RBP7.75□□□□□ -1.17
HERC1-206ENST00000559996 KIAA2026Q5HYC2 2103 aa7.75□□□□□ -1.17
HERC1-206ENST00000559996 ISPDA4D126 451 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 A8MXK9 166 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 C22orf46C9J442 243 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 ORC5O43913 435 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 RCC1P18754 421 aaPredicted RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 KCNJ3P48549 501 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 PPP5CP53041 499 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 DLX6P56179 175 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 IL18Q14116 193 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 RBM39Q14498 530 aaKnown RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 ATXN7L3Q14CW9 347 aaPredicted RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 GRK1Q15835 563 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 KCNJ8Q15842 424 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 FAM131AQ6UXB0 335 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 BAIAP2L2Q6UXY1 529 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 OR13A1Q8NGR1 328 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 C8orf46Q8TAG6 207 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 CORO2AQ92828 525 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 TRIM63Q969Q1 353 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 CMSS1Q9BQ75 279 aaKnown RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 Q9N2K0 584 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 C19orf12Q9NSK7 152 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 ZNF230Q9UIE0 474 aaPredicted RBP7.74□□□□□ -1.17
HERC1-206ENST00000559996 KIF25Q9UIL4 384 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 CR1P17927 2039 aa7.74□□□□□ -1.17
HERC1-206ENST00000559996 ABCA2Q9BZC7 2435 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 MEIS3P1A6NDR6 274 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 C15orf65H3BRN8 121 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 H3BUI4 141 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 GABARAPH6UMI1 98 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 J3QRK9 145 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 SULT1C2O00338 296 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
HERC1-206ENST00000559996 NDUFB3O43676 98 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 FCGR3AP08637 254 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 RPS2P15880 293 aaKnown RBP7.73□□□□□ -1.17
HERC1-206ENST00000559996 SLC25A16P16260 332 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 PRSS3P35030 304 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 P2RX3P56373 397 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 ERVFRD-1P60508 538 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 LOXL1Q08397 574 aaPredicted RBP7.73□□□□□ -1.17
HERC1-206ENST00000559996 ZNF273Q14593 569 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 ARL6IP1Q15041 203 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 SRSF7Q16629 238 aaKnown RBP eCLIP7.73□□□□□ -1.17
HERC1-206ENST00000559996 C17orf58Q2M2W7 97 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 KRBOX4Q5JUW0 171 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 UTF1Q5T230 341 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 TMEM200BQ69YZ2 307 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 Q6ZS49 121 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 BTN2A1Q7KYR7 527 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 HOGA1Q86XE5 327 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 CIARTQ8N365 385 aaPredicted RBP7.73□□□□□ -1.17
HERC1-206ENST00000559996 TMEM185AQ8NFB2 350 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 OR4K15Q8NH41 348 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 SMIM4Q8WVI0 70 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 S100ZQ8WXG8 99 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 MAFIPQ8WZ33 124 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 SNAPC3Q92966 411 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 PHF21AQ96BD5 680 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 Q96MF0 132 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 REG4Q9BYZ8 158 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 LINC00574Q9H8X3 128 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 ING3Q9NXR8 418 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 RABL2AQ9UBK7 228 aaPredicted RBP7.73□□□□□ -1.17
HERC1-206ENST00000559996 MTFP1Q9UDX5 166 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 RABL2BQ9UNT1 228 aa7.73□□□□□ -1.17
HERC1-206ENST00000559996 IGKV1-6A0A0C4DH72 117 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 ODAMA1E959 279 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 MEX3AA1L020 520 aaKnown RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 NKX6-3A6NJ46 265 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 MMP23AO75900 390 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 CD3GP09693 182 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 NDUFB7P17568 137 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 DTYMKP23919 212 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 CD40LGP29965 261 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 TALDO1P37837 337 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 GDNFP39905 211 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 NPY4RP50391 375 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 PITPNAQ00169 270 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 HERPUD1Q15011 391 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 HMGN3Q15651 99 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 LRRC10Q5BKY1 277 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 SPANXN2Q5MJ10 180 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 TRAPPC6BQ86SZ2 158 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 GDPD1Q8N9F7 314 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 OR8B3Q8NGG8 313 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 PPP1R35Q8TAP8 253 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms