RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 BAK1Q16611 211 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 MICBQ29980 383 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ZNF181Q2M3W8 571 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 DEFB113Q30KQ7 82 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 PAN3Q58A45 887 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 NHLRC3Q5JS37 347 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 Q5PR19 223 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 RSBN1Q5VWQ0 802 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 OR52W1Q6IF63 320 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 FAAP20Q6NZ36 180 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 BAIAP2L2Q6UXY1 529 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 TCF23Q7RTU1 214 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 TRAPPC6BQ86SZ2 158 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 Q8IYB0 196 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 C1orf87Q8N0U7 546 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 FAM89BQ8N5H3 189 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 OR56B1Q8NGI3 324 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 OR52I2Q8NH67 350 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 CLDND2Q8NHS1 167 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 SETD6Q8TBK2 473 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 NEK7Q8TDX7 302 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 NEU4Q8WWR8 484 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 ST8SIA4Q92187 359 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ERGIC1Q969X5 290 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 PTX4Q96A99 478 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 S100A16Q96FQ6 103 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 NEDD4LQ96PU5 975 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 URM1Q9BTM9 101 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 SHARPINQ9H0F6 387 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 CHODLQ9H9P2 273 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 LPAR2Q9HBW0 351 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 TMEM165Q9HC07 324 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 CHMP1AQ9HD42 196 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 C19orf12Q9NSK7 152 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ZNF701Q9NV72 531 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 PLEKHJ1Q9NW61 149 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ETAA1Q9NY74 926 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 RCC2Q9P258 522 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 A3GALT2U3KPV4 340 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 SVEP1Q4LDE5 3571 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MAP1AP78559 2803 aaPredicted RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 TRBV23-1A0A0A0MS06 115 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 FAM172BPA6NC97 362 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 METTL21EPA6NDL7 271 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 NKX6-3A6NJ46 265 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 FAM157AC9JC47 383 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 M0QYG6 137 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 DVL1O14640 695 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 SH2D1BO14796 132 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 SIGLEC5O15389 551 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MMP23AO75900 390 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 IGHV3-7P01780 117 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 TK1P04183 234 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 CSN2P05814 226 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 FCGR3AP08637 254 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ACAA1P09110 424 aaPredicted RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 CSF3P09919 207 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 RPS2P15880 293 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 NDUFB7P17568 137 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 RCC1P18754 421 aaPredicted RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 FUT3P21217 361 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 DNASE1P24855 282 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ZFP36P26651 326 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 SSTR5P35346 364 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 TALDO1P37837 337 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MDH2P40926 338 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 ETV6P41212 452 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 GLP1RP43220 463 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 PDLIM4P50479 330 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 EDDM3BP56851 147 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 SCAND1P57086 179 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ARFRP1Q13795 201 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 GPR176Q14439 515 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ZNF273Q14593 569 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 GRK1Q15835 563 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 LTC4SQ16873 150 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 CLEC12BQ2HXU8 276 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MPV17LQ2QL34 196 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 SPIN3Q5JUX0 258 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 SPANXN2Q5MJ10 180 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 HACD4Q5VWC8 232 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 CD276Q5ZPR3 534 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ZNF788Q6ZQV5 615 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 PRR18Q8N4B5 295 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 NUDT10Q8NFP7 164 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 OR4D10Q8NGI6 311 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 OR13A1Q8NGR1 328 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MRPL30Q8TCC3 161 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 MRGPRDQ8TDS7 321 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 C10orf105Q8TEF2 133 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 RAB40AQ8WXH6 277 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 H1FXQ92522 213 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 SNAPC3Q92966 411 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 TRIM63Q969Q1 353 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms