RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TMPRSS11AQ6ZMR5 421 aa14.13□□□□□ -0.15
HDDC3-205ENST00000559898 STMN2Q93045 179 aa14.13□□□□□ -0.15
HDDC3-205ENST00000559898 TMEM80Q96HE8 168 aa14.13□□□□□ -0.15
HDDC3-205ENST00000559898 DPCDQ9BVM2 203 aaPredicted RBP14.13□□□□□ -0.15
HDDC3-205ENST00000559898 OR6C3Q9NZP0 311 aa14.13□□□□□ -0.15
HDDC3-205ENST00000559898 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.13□□□□□ -0.15
HDDC3-205ENST00000559898 PSG11Q9UQ72 335 aa14.13□□□□□ -0.15
HDDC3-205ENST00000559898 NPIPB11E5RHQ5 1161 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 J3QR06 171 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 PIN1P1O15428 100 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 MAGEB3O15480 346 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 IL1AP01583 271 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 BDKRB2P30411 391 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 VHLP40337 213 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 ST3GAL4Q11206 333 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 OSR2Q8N2R0 312 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 DHRSXQ8N5I4 330 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 CCDC107Q8WV48 283 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 R3HDM4Q96D70 268 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
HDDC3-205ENST00000559898 OR14A2Q96R54 314 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 MYCBPQ99417 103 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-205ENST00000559898 ZNF184Q99676 751 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-205ENST00000559898 TMEM138Q9NPI0 162 aa14.12□□□□□ -0.15
HDDC3-205ENST00000559898 EXOSC1Q9Y3B2 195 aaKnown RBP14.12□□□□□ -0.15
HDDC3-205ENST00000559898 TRBV5-7A0A0A0MS05 114 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 A0A1W2PPI3 338 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 OR7C1O76099 320 aaPredicted RBP14.11□□□□□ -0.15
HDDC3-205ENST00000559898 CD2P06729 351 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 C21orf33P30042 268 aaPredicted RBP14.11□□□□□ -0.15
HDDC3-205ENST00000559898 INSL4Q14641 139 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 NDUFA11Q86Y39 141 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 DRAM1Q8N682 238 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 OR52N1Q8NH53 320 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 OR56B4Q8NH76 319 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 OR9G1Q8NH87 305 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 CAPSLQ8WWF8 208 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 SGCDQ92629 289 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 MUL1Q969V5 352 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 METTL9Q9H1A3 318 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 LINC00574Q9H8X3 128 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 LIN7BQ9HAP6 207 aa14.11□□□□□ -0.15
HDDC3-205ENST00000559898 IGHV3-43A0A0B4J1X8 118 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A18PA6NE21 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A16PA6NEW6 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A20PA6NIJ5 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A9PA6NNJ1 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A12PA8MX19 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A5PA8MXJ8 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 PEX14O75381 377 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 OR2F2O95006 317 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 SNRNP70P08621 437 aaKnown RBP14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A15PP0C7V4 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A13PP0C7W8 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A14PP0C7W9 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 FAM90A24PP0C7X0 464 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 IGHV3-43DP0DP04 118 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 MYL12AP19105 171 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 PRRX1P54821 245 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 CD83Q01151 205 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 RIPK1Q13546 671 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 SLC22A6Q4U2R8 563 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 OGFRL1Q5TC84 451 aaPredicted RBP14.1□□□□□ -0.15
HDDC3-205ENST00000559898 TTC23Q5W5X9 447 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 BARHL1Q9BZE3 327 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 IL36GQ9NZH8 169 aa14.1□□□□□ -0.15
HDDC3-205ENST00000559898 C15orf65H3BRN8 121 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 SLC31A2O15432 143 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 MAS1P04201 325 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 BRS3P32247 399 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 CAPGP40121 348 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 REG1BP48304 166 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 GP2P55259 537 aaKnown RBP14.09□□□□□ -0.15
HDDC3-205ENST00000559898 PPP3R1P63098 170 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 HNF4GQ14541 408 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 Q499Y3 187 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 NHLRC3Q5JS37 347 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 C9orf152Q5JTZ5 239 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 ATAD3CQ5T2N8 411 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 KPRPQ5T749 579 aaPredicted RBP14.09□□□□□ -0.15
HDDC3-205ENST00000559898 AHSA2Q719I0 299 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 HAVCR2Q8TDQ0 301 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 FBLIM1Q8WUP2 373 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 TOMM40LQ969M1 308 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 NCOR1P1Q9H4R4 102 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 BANF2Q9H503 90 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 IFT22Q9H7X7 185 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 NKX1-2Q9UD57 310 aaPredicted RBP14.09□□□□□ -0.15
HDDC3-205ENST00000559898 PSORS1C1Q9UIG5 152 aa14.09□□□□□ -0.15
HDDC3-205ENST00000559898 IGHV3-72A0A0B4J1Y9 119 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 GPX5O75715 221 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 PAX5Q02548 391 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 GLIPR1L1Q6UWM5 242 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 PACRGLQ8N7B6 248 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 ZNF565Q8N9K5 539 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 TMEM104Q8NE00 496 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 BPIFB6Q8NFQ5 453 aa14.08□□□□□ -0.16
HDDC3-205ENST00000559898 RPEQ96AT9 228 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms