RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ANKRD60Q9BZ19 345 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 ZNF286AQ9HBT8 521 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 ZNF581Q9P0T4 197 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 FOXJ3Q9UPW0 622 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 TCF19Q9Y242 345 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 SIGLEC9Q9Y336 463 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 NBEAL1Q6ZS30 2694 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 KBTBD11-OT1A0A1B0GTJ5 212 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 TMEM30CPA0ZSE6 113 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 LEUTXA8MZ59 168 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 M0QZ24 198 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 TIMM23O14925 209 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 PIN1P1O15428 100 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 PEX14O75381 377 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 GPX5O75715 221 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 IL1AP01583 271 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 IGHV3-7P01780 117 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 VSIG10L2P0DP72 767 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 MGMTP16455 207 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 BRS3P32247 399 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 SSTR5P35346 364 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 GNG10P50151 68 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 SLC35A2P78381 396 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 GPR50Q13585 617 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 INSL4Q14641 139 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 C17orf58Q2M2W7 97 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 HLA-DRB5Q30154 266 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 NHLRC3Q5JS37 347 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 FAM27D1Q5T7N8 215 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 RSBN1Q5VWQ0 802 aaPredicted RBP6.61□□□□□ -1.35
SNX1-207ENST00000559401 LIPKQ5VXJ0 399 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 RNLSQ5VYX0 342 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 TREML4Q6UXN2 200 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 Q6ZTK2 550 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 CEACAM19Q7Z692 300 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 Q8NFD4 153 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 OR4P4Q8NGL7 312 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 OR9G1Q8NH87 305 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 UBALD1Q8TB05 177 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 PIFOQ8TCI5 191 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 CCDC107Q8WV48 283 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 TOMM40LQ969M1 308 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 TMEM203Q969S6 136 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 FAM46BQ96A09 425 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 KIRREL1Q96J84 757 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 CITED1Q99966 193 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 SELENOIQ9C0D9 397 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 BANF2Q9H503 90 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 RANBP3Q9H6Z4 567 aaPredicted RBP6.61□□□□□ -1.35
SNX1-207ENST00000559401 ZNF696Q9H7X3 374 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 SPACA1Q9HBV2 294 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 IDI2-AS1Q9NZ38 188 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 DPM3Q9P2X0 92 aa6.61□□□□□ -1.35
SNX1-207ENST00000559401 LSM2Q9Y333 95 aaKnown RBP6.61□□□□□ -1.35
SNX1-207ENST00000559401 AMMECR1Q9Y4X0 333 aaPredicted RBP6.61□□□□□ -1.35
SNX1-207ENST00000559401 TET2Q6N021 2002 aaPredicted RBP6.6□□□□□ -1.35
SNX1-207ENST00000559401 ANK2Q01484 3957 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 A6NDX4 124 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 MCRIP1C9JLW8 97 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 BUB1B-PAK6H3BSN5 160 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 AIPO00170 330 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 ATP6V1G2O95670 118 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 MPIG6BO95866 241 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 CD24P25063 80 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 CD34P28906 385 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 MNDAP41218 407 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 HABP2Q14520 560 aaPredicted RBP6.6□□□□□ -1.35
SNX1-207ENST00000559401 HSD17B12Q53GQ0 312 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 NKAPLQ5M9Q1 402 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 TPTE2P1Q5T6R2 138 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 GLT8D1Q68CQ7 371 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 RAB12Q6IQ22 244 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
SNX1-207ENST00000559401 CDH26Q8IXH8 852 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 PRR18Q8N4B5 295 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 KLHDC1Q8N7A1 406 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 ARL11Q969Q4 196 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 RPEQ96AT9 228 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 CREB3L1Q96BA8 519 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 MRPS24Q96EL2 167 aaKnown RBP6.6□□□□□ -1.35
SNX1-207ENST00000559401 UQCC2Q9BRT2 126 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 PRSS22Q9GZN4 317 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 CST11Q9H112 138 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 ETAA1Q9NY74 926 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 FBLN5Q9UBX5 448 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 TRAPPC2LQ9UL33 140 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 BLOC1S6Q9UL45 172 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 PEX16Q9Y5Y5 336 aa6.6□□□□□ -1.35
SNX1-207ENST00000559401 IGHV3-43A0A0B4J1X8 118 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 UBE2QL1A1L167 161 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 J3QR06 171 aa6.59□□□□□ -1.35
SNX1-207ENST00000559401 SDCBPO00560 298 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms