RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 LTC4SQ16873 150 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 RSBN1Q5VWQ0 802 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-213ENST00000559399 C10orf67Q8IYJ2 551 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 DRAM1Q8N682 238 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 Q8NFD4 153 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 OR10K1Q8NGX5 313 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 GPR148Q8TDV2 347 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 RGP1Q92546 391 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-213ENST00000559399 LEAP2Q969E1 77 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
LRRC28-213ENST00000559399 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 SSTR5P35346 364 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 GNG10P50151 68 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 RAB7AP51149 207 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 GTF2A1P52655 376 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-213ENST00000559399 PPP3R1P63098 170 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 HES1Q14469 280 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 KLHL22Q53GT1 634 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 ASCL4Q6XD76 172 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 SLC16A12Q6ZSM3 486 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 OR10A7Q8NGE5 316 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 APH1BQ8WW43 257 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 SLC29A1Q99808 456 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-213ENST00000559399 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 ZNF281Q9Y2X9 895 aa11.86□□□□□ -0.51
LRRC28-213ENST00000559399 HTR3BO95264 441 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 MPIG6BO95866 241 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 TMEM11P17152 192 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 CCDC58Q4VC31 144 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 XAF1Q6GPH4 301 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
LRRC28-213ENST00000559399 C5orf56Q8N8D9 126 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 SUMF2Q8NBJ7 301 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 RFESDQ8TAC1 157 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 TMEM106AQ96A25 262 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 IFT22Q9H7X7 185 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 TMEM138Q9NPI0 162 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
LRRC28-213ENST00000559399 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 FGF16O43320 207 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 OR7C1O76099 320 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-213ENST00000559399 CDRT1O95170 752 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 ZNF93P35789 620 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-213ENST00000559399 RBM11P57052 281 aaKnown RBP11.84□□□□□ -0.51
LRRC28-213ENST00000559399 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 DDI2Q5TDH0 399 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 TMPRSS11AQ6ZMR5 421 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 ZNF329Q86UD4 541 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 METTL9Q9H1A3 318 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 FGF20Q9NP95 211 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-213ENST00000559399 IL36GQ9NZH8 169 aa11.84□□□□□ -0.51
LRRC28-213ENST00000559399 TRAV39A0A0B4J263 110 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 HSD17B6O14756 317 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
LRRC28-213ENST00000559399 DCKP27707 260 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 ETV1P50549 477 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 HNF4GQ14541 408 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 SMN1Q16637 294 aaKnown RBP11.83□□□□□ -0.52
LRRC28-213ENST00000559399 LINC00596Q86U02 117 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF555Q8NEP9 628 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 OR52N1Q8NH53 320 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 CHPT1Q8WUD6 406 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 SMIM19Q96E16 107 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 S100A13Q99584 98 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 GPR61Q9BZJ8 451 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 PAK1IP1Q9NWT1 392 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 ING4Q9UNL4 249 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 PLXNB1O43157 2135 aa11.83□□□□□ -0.52
LRRC28-213ENST00000559399 NOTCH3Q9UM47 2321 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 A0A1W2PPE3 182 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 IRGMA1A4Y4 181 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 K7EIL1 84 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 CCRL2O00421 344 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 GEMIN2O14893 280 aaKnown RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF780AO75290 641 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 WBP4O75554 376 aaKnown RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 MYL12AP19105 171 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 GZMHP20718 246 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 SERPINA2P20848 420 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 BDKRB2P30411 391 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 RPL23AP62750 156 aaKnown RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 SLC35B1P78383 322 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF816Q0VGE8 651 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms