RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ACTG1P63261 375 aa15□□□□□ -0.01
CLPX-203ENST00000558958 CLEC12BQ2HXU8 276 aa15□□□□□ -0.01
CLPX-203ENST00000558958 TRIQKQ629K1 86 aa15□□□□□ -0.01
CLPX-203ENST00000558958 ZNF880Q6PDB4 577 aa15□□□□□ -0.01
CLPX-203ENST00000558958 HOGA1Q86XE5 327 aa15□□□□□ -0.01
CLPX-203ENST00000558958 TPRX1Q8N7U7 411 aa15□□□□□ -0.01
CLPX-203ENST00000558958 OR8B3Q8NGG8 313 aa15□□□□□ -0.01
CLPX-203ENST00000558958 OR4K15Q8NH41 348 aa15□□□□□ -0.01
CLPX-203ENST00000558958 OR8B2Q96RD0 313 aa15□□□□□ -0.01
CLPX-203ENST00000558958 ST6GALNAC5Q9BVH7 336 aa15□□□□□ -0.01
CLPX-203ENST00000558958 NCOR1P1Q9H4R4 102 aa15□□□□□ -0.01
CLPX-203ENST00000558958 IFT46Q9NQC8 304 aa15□□□□□ -0.01
CLPX-203ENST00000558958 PDZD2O15018 2839 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 MEIKINA0A087WXM9 373 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 FUOMA2VDF0 154 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 FCER2P06734 321 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 NAT1P18440 290 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 RCVRNP35243 200 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 EDDM3BP56851 147 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 IFITM3Q01628 133 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 SRSF7Q16629 238 aaKnown RBP eCLIP14.99□□□□□ -0.01
CLPX-203ENST00000558958 MAFIPQ8WZ33 124 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 Q9N2K0 584 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 ABCB10Q9NRK6 738 aa14.99□□□□□ -0.01
CLPX-203ENST00000558958 A0A1W2PQ09 198 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 ODAMA1E959 279 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 IGHV2-5P01817 119 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 MOB1BQ7L9L4 216 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 CLDND2Q8NHS1 167 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 SETD6Q8TBK2 473 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 CCDC107Q8WV48 283 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 SNAPC3Q92966 411 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 MBNL3Q9NUK0 354 aaKnown RBP14.98□□□□□ -0.01
CLPX-203ENST00000558958 ZNF107Q9UII5 783 aaPredicted RBP14.98□□□□□ -0.01
CLPX-203ENST00000558958 TRAPPC2LQ9UL33 140 aa14.98□□□□□ -0.01
CLPX-203ENST00000558958 MAP1AP78559 2803 aaPredicted RBP14.98□□□□□ -0.01
CLPX-203ENST00000558958 IGKV1D-8A0A087WSZ0 117 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 TRAV39A0A0B4J263 110 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 ANKRD20A5PA0PJZ0 165 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 GPR37O15354 613 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 GSTT2BP0CG30 244 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 RCC1P18754 421 aaPredicted RBP14.97□□□□□ -0.01
CLPX-203ENST00000558958 NPY4RP50391 375 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 SEC61A1P61619 476 aaKnown RBP14.97□□□□□ -0.01
CLPX-203ENST00000558958 LMO4P61968 165 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
CLPX-203ENST00000558958 STEAP3Q658P3 488 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 OR52W1Q6IF63 320 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 C16orf87Q6PH81 154 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 PRSS57Q6UWY2 283 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 Q6ZS49 121 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 LYSMD2Q8IV50 215 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 BEST4Q8NFU0 473 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 TAS2R8Q9NYW2 309 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 CLN8Q9UBY8 286 aa14.97□□□□□ -0.01
CLPX-203ENST00000558958 CSF1P09603 554 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 SLC25A16P16260 332 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 DCTN2Q13561 401 aaKnown RBP14.96□□□□□ -0.01
CLPX-203ENST00000558958 KLF9Q13886 244 aaPredicted RBP14.96□□□□□ -0.01
CLPX-203ENST00000558958 Q5PR19 223 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 TOMM5Q8N4H5 51 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 TMEM229BQ8NBD8 167 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 OR13A1Q8NGR1 328 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 DCTN5Q9BTE1 182 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 ZNF286AQ9HBT8 521 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 PALMDQ9NP74 551 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 MALRD1Q5VYJ5 2156 aa14.96□□□□□ -0.01
CLPX-203ENST00000558958 IGHV4-61A0A0C4DH41 118 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ECDO95905 644 aaPredicted RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 INPP1P49441 399 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 RPL31P62899 125 aaKnown RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 MEF2CQ06413 473 aaPredicted RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 CR1LQ2VPA4 569 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ESCO2Q56NI9 601 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ZNF57Q68EA5 555 aaPredicted RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 H1FXQ92522 213 aaKnown RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 SSBP3Q9BWW4 388 aaPredicted RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 C19orf12Q9NSK7 152 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 OR6C3Q9NZP0 311 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ANXA10Q9UJ72 324 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 MGAT4AQ9UM21 535 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 CSMD1Q96PZ7 3565 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ZNF736B4DX44 427 aaPredicted RBP14.95□□□□□ -0.02
CLPX-203ENST00000558958 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 CD3DP04234 171 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 HLA-DMAP28067 261 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 GLP1RP43220 463 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 TAS2R19P59542 299 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 AP3S2P59780 193 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 GNB2P62879 340 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 C6orf183Q5T699 404 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 TCF23Q7RTU1 214 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 KRTAP1-3Q8IUG1 177 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 ZNF565Q8N9K5 539 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 MRGPRDQ8TDS7 321 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 CORO2AQ92828 525 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 RAB39BQ96DA2 213 aa14.95□□□□□ -0.02
CLPX-203ENST00000558958 TRGV10A0A0A0MS01 117 aa14.94□□□□□ -0.02
CLPX-203ENST00000558958 TRBV23-1A0A0A0MS06 115 aa14.94□□□□□ -0.02
CLPX-203ENST00000558958 KIR2DS1A0A191URI9 304 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms